Lates calcarifer (barramundi perch): 108895383
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Entry
108895383 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: protein diaphanous homolog 2
KO
K05741
diaphanous 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04810
Regulation of actin cytoskeleton
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108895383
04810 Regulation of actin cytoskeleton
108895383
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108895383
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
108895383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
Drf_FH3
Drf_GBD
FH3_FHOD1-3
Drf_DAD
CCDC53
Motif
Other DBs
NCBI-GeneID:
108895383
NCBI-ProteinID:
XP_050928450
UniProt:
A0AAJ8B9I6
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Position
LG8:complement(17172557..17516695)
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AA seq
1142 aa
AA seq
DB search
MDQASGGEDPNKPSKKRSNEDEGKNKKLNIHIKTLADDMRDRITSFRKTGMKKEKPLIQH
PTDPLSTQAELPVPQPLFDDRSMNLSEKEIIDLFEKMMEDMNLNEERKAPLRGKDLSTKR
EMVVQYISATAKSGGLRNSKHECTLSSQEYVHELRSGITEEKLLNCLESLRVSLTSNPVS
WVNNFGHEGLGLLLDALEKLLDKKQQENIDKRNQHKLIQCLKAFMNNKYGLQRILGDERS
LLLLARAIDPKQTNMMTEIVKILSAFCIIGEENILDKILAAMTIAAERNNKERFAPIVEG
LENHEAQQLQVACMQLINALVTSPDDLDFRIHLRNEFLRCGLKKILPELKETEELDIQLK
VFNENKEEDSIELSHRLDDIRAEMDDMNEVYHLLSNMVKDTGSETYFLSILQHLLLIRND
YYIRPQYYKVIEECVSQVVLHRNGMDPDFGYSKRLDVDFTHLIDQCVDKAKVDESEQKAA
EYSKKFDEEFSARQEAQAESQKKEERIKELEGKIQALESQLTIEKDKLKEAQRLIRESEA
KIAAGPAAPGAPPPPPLPGGAAAPPPPPPPPPPPPPGGCPPPPPPPLPGHAGIPPPPPPP
PPPGGGPPPPPPPPGCGPPPPPPFFGGPGAPPPPPQLAVVKLPYGLEPKKTYKPETVMKR
VNWTKIVPQEMAENCFWIKVKEEKFENPDLFAQLSLSFSSQSKVKKDVKDETDDRMTQFK
KKAKELRILDAKTAQNLSIFLGSFRLPYEEIRDIVLEVDEERLSESLIQNLIKNLPEQKE
LSALAELKGEYEELVESEQFGIVMSSVKLLRPRLNGILFKLTFEEQVNNIRPDIMNVTFA
CEEVKKSEGFSRLLELVLMVGNYMNAGSRNAQTFGFNISFLCKLRDTKSTSQNTTLLHFL
AEKCEENHPEILRFPDELEHVENASKVSAEILKSSLTTMERHIQRLENDIENFPKTDDQQ
DKFVEKMSGFCKHAREQYEKLAIMHKNMQKLYENIGSYFAFDPHSVSVEDFFGELANFRI
LFMEAVKENHKKREMEEKIKRAKLAKEKAEREKQERQQKKKQLIDMNKEGDETGVMDSLM
EALQSGAAFRDRRKRTPRNGDQSPSSPASRWPGANYGNRTLDNRRAVLERSRSRHNANHQ
AR
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagccagcggtggggaggacccgaataaaccctccaaaaagaggtccaacgag
gatgagggtaaaaacaaaaagctgaacatacacataaaaacattggctgatgatatgcgc
gatcgtattaccagtttcagaaaaacagggatgaagaaggagaagccccttatacagcac
ccaacagatcccctctctacccaggctgaactgcctgttcctcagccgctttttgacgac
cgctccatgaacctctcagaaaaggagatcattgacctctttgagaagatgatggaggac
atgaacctgaatgaggaacgcaaagcccctctacgtggaaaggacttgagcaccaaacgt
gagatggtggtccagtacatctcagccactgctaaatctggtggactaaggaacagcaag
catgagtgtacactttcatcccaagaatatgtccatgaactgcgttctggcatcacagag
gaaaagctgctcaattgcctggagtccctcagagtgtctctcaccagtaaccctgtcagt
tgggttaataacttcggtcatgagggtcttggccttctcctggatgctttggagaaactg
ctggacaagaaacagcaagagaatattgataaacggaaccagcataaactcatccaatgc
ctgaaggctttcatgaacaataagtatggactgcaaaggatcttgggagatgagcggagc
ctgttgctgctggcacgagcaattgaccccaaacagaccaacatgatgacagagattgtt
aaaattctctctgccttctgtattattggagaggaaaacatcctggataagattctagct
gccatgacaattgctgcagaaaggaacaataaagagagatttgctccaattgtggaagga
ctggagaaccacgaagcccagcagctccaggttgcttgcatgcagctgatcaatgctttg
gtcacttcccctgatgacctggacttccggatacatctgcgcaatgagtttttgagatgt
ggcctcaagaagatcctgcctgagctaaaagaaacagaggaacttgacatccagctgaag
gtgttcaatgagaacaaggaggaggactctatcgaactctcccatcgcctggatgacatc
cgtgctgagatggatgatatgaatgaagtgtaccatctcctgtccaatatggtgaaagac
actggctcagagacctacttcctgtcaatccttcagcacctattgcttatcaggaatgac
tattacatcaggcctcagtactacaaggtgatagaagaatgcgtgtctcaggtggtatta
catcgcaatgggatggaccctgactttggctacagtaaaagattggatgtggacttcacc
catctgattgatcagtgtgtggataaagccaaagttgacgagagcgagcagaaggctgca
gaatactccaaaaagtttgatgaggagttcagtgcacggcaggaggcccaggccgagtct
caaaagaaggaagagagaatcaaagagttggaggggaagatccaggccctggagtcccag
ttaactattgaaaaagacaagctcaaagaggctcagagactcatcagggaatctgaagcc
aagatcgcagcaggtccagctgcgccaggagcaccacctccaccacccctaccagggggt
gctgcagctccacctcctcctccacctcctcctcccccacctccacccggaggctgtcct
cctccacctcctcctcctctcccaggacatgctggtattccaccaccaccaccgccacca
cctcccccaggtggaggacctccacctcccccaccacctcctggttgtgggcctccacct
cctccgcctttttttggaggccctggtgctcctccgccacctcctcaattggctgttgtc
aagctgccttatgggctggagcccaagaaaacctataagcctgaaactgtgatgaagagg
gtcaactggaccaagatagtgcctcaggaaatggcagagaattgcttctggatcaaagtc
aaagaagagaagtttgagaatcctgacctatttgctcagctctccctcagcttctcctca
cagagcaaagtgaaaaaagacgtaaaagatgaaactgatgacagaatgacacaattcaag
aaaaaggcgaaagagctccgtatcttggacgccaagacagcacagaatctttcaattttc
ctgggctcgttccgcctgccttatgaagagatccgggacattgtgctggaggtagacgag
gaaagactgagcgaatcactcatccagaacctgataaagaacctgccagagcagaaagag
ctgagtgcgctagcggaactaaagggtgaatatgaagagctagtggagtcggagcagttt
ggcattgtgatgagttcagtaaagctcctacggccgcgtctcaacggcattctgttcaag
ctgacgtttgaggagcaggtgaataacatccggccagacatcatgaatgtgacatttgcc
tgtgaggaggtgaagaagagtgagggctttagcagactcctggagttggtgttgatggtt
ggcaattacatgaatgctggttcaaggaatgcccagacatttggtttcaacatcagcttc
ctctgcaagctccgagacactaaatccaccagtcagaatacaacacttcttcatttcctg
gctgagaagtgtgaagagaatcacccagaaattttgaggtttccagatgaactggagcat
gtggagaacgccagcaaagtgtcagctgagatcttaaagagcagtttgaccaccatggaa
cgtcacattcagagacttgagaacgacatcgagaacttccccaaaacagacgaccagcaa
gataagtttgttgaaaagatgtcgggcttctgcaagcatgcccgggagcagtatgaaaaa
ctagccatcatgcacaagaacatgcaaaagctctatgagaacataggcagctattttgcc
tttgacccccactctgtcagcgtggaggatttcttcggagaactggccaacttccgcatc
ctcttcatggaagcagtgaaggagaaccacaagaagagggagatggaggagaagatcaag
agagccaagctggcgaaggagaaagcagagcgcgagaagcaggagcgccagcagaagaag
aagcagctgattgacatgaacaaagagggagatgagactggtgtgatggatagcctaatg
gaagctctacagtccggagcagccttccgtgatcggcgaaaacggacaccgcgcaatggt
gatcaaagtccttccagtccagcctctcggtggccgggtgctaactatggtaacagaacc
ctagacaaccgccgtgcagtcctggaaaggtctcgttcacgccacaacgcaaatcaccaa
gctcgatga
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