Lates calcarifer (barramundi perch): 108895385
Help
Entry
108895385 CDS
T04895
Symbol
ogdhb
Name
(RefSeq) 2-oxoglutarate dehydrogenase complex component E1
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00020
Citrate cycle (TCA cycle)
lcf00785
Lipoic acid metabolism
lcf01100
Metabolic pathways
lcf01200
Carbon metabolism
lcf01210
2-Oxocarboxylic acid metabolism
Module
lcf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lcf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
108895385 (ogdhb)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
108895385 (ogdhb)
Enzymes [BR:
lcf01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
108895385 (ogdhb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Baculo_LEF5_C
Motif
Other DBs
NCBI-GeneID:
108895385
NCBI-ProteinID:
XP_018549694
UniProt:
A0A4W6F0G6
LinkDB
All DBs
Position
LG9:complement(999566..1016767)
Genome browser
AA seq
1022 aa
AA seq
DB search
MHRLRTTVARLRPLTAAQTAQSLSQPRPLAVEGGLRTFQPARRLNTSVAAEPFLNGTSSN
YVEEMYYAWLENPRNVHKSWDIFFRNANAGAPPGAAYQSPPPFAGTSQGLASVQALVGAQ
PNVEKLVEDHLAVQSLIRAYQVRGHHIAKLDPLDISCVDFDDAPCTVGFQNVGFYGLAES
DLDKVFRLPTTTFIGGNESSLPLREIIRRLEMAYCQHIGVEFMFINDVEQCQWIRQKFET
PGIMQFSLEEKRTLLARMIRSTRFEEFLQRKWSSEKRFGLEGCESLIPALKTIIDKSSQS
GVESVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHKRMNR
VSDRLITLSLMANPSHLEAVDPVVQGKAKAEQFYCGDTEGKRVMSILLHGDAAFAGQGIV
YETFHLSDLPSYTTHGTIHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNADDP
EAVMYVCNVAAEWRNTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLMYKQIKKQKGVLQKF
AEKVIAEGVITMQEYEEEVARYDKICEEAYARSKDEKILHIKHWLDSPWPGFFTLEGQPK
SMNCPSTGISEEELGHIGNIAASVPVEDFTIHGGLSRILKGRGNMVNQRVCDWALGEYMA
FGSLLKEGIHVRLSGQDVERGTFSHRHHVLHDQNVDKRICIPMNYISPDQAPYTVCNSSL
SEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQFISSGQAKWVRQNGIVLLLP
HGMEGMGPEHSSARPERFLQMCNDDPDVFPKLSEDFAVRQLYDCNWIVVNCSTPANYFHV
LRRQILQPFRKPLIVFTPKSLLRHPEAKSSFDDMLPGTHFKRIIPDDGAAASGPEKVKRI
IFCTGKIYYELTRERKNRGMDEAVAVVRIEQLSPFPFDLVKAETDRYLNADLVWCQEEHK
NQGYYDYIKPRIRTTISRTRPVWYAGRDPAAAPATGNKQTHLMELQRLLDTAFDLEAFSG
KV
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcttaaggactacagttgcaaggcttcggcctttaacggctgcacagacagcc
cagagcctatcacagcccaggccgttggcggtcgaagggggcttaaggacgtttcagccc
gcgaggcgcttgaacacatctgtggccgctgagccgtttctcaatggcaccagctccaac
tacgtggaggagatgtactatgcatggctggagaatcccaggaatgtgcacaagtcctgg
gatatatttttccgtaatgctaacgcaggggctccgcctggtgcggcctaccagagccct
ccacccttcgctgggacttctcagggactggccagtgtccaggcactggtgggggctcag
cccaacgtggagaagctggtggaggatcatttagcggtgcagtcactcatacgagcatac
caggtacgagggcatcacatagcgaagctggacccgctggacatcagctgtgtggacttt
gacgatgccccgtgtaccgttggtttccagaacgttggtttctacgggctggctgaatcc
gacctggacaaggtgttccggcttcctaccaccaccttcatcggtggcaatgagagctct
ttgcctctcagggaaatcatacgccgccttgagatggcctactgtcaacatatcggagtc
gagtttatgttcattaatgacgttgagcagtgccagtggatcaggcagaagtttgagact
ccaggaatcatgcagttcagtctggaggagaagaggactctgttggccaggatgatccga
tccaccaggtttgaggagtttctccagaggaagtggtcgtctgagaaacgcttcggtctg
gaaggttgtgaatcgctcatcccagccctcaagaccatcatcgacaagtccagtcagagc
ggagtggagagcgtgatcatgggcatgcctcacagaggtcggctgaatgtgctcgctaat
gtgatccggaaggaactggaacagatcttctgccagtttgactccaaactagaagctgca
gatgagggttctggtgatgtgaaatatcatttggggatgtatcacaaaaggatgaaccgg
gtcagcgaccgcctcatcacgttgtcactcatggcgaacccgtcccaccttgaagcagtg
gacccagtggtgcagggaaaagccaaagctgagcagttctactgtggcgacactgagggc
aagagggtgatgtctattctgcttcacggtgatgctgcatttgcaggccagggcatcgtg
tacgagacgttccacctgtctgatctgccgtcttacaccacccacggcaccatacatgtg
gtggtcaacaaccagattggcttcacgacagatcccaggatggctcgatcatctccttac
cctacagacgtggctcgggtcgtaaatgctcccatctttcacgtcaatgcagacgaccca
gaggccgtgatgtatgtgtgtaacgtggcagctgagtggaggaacaccttccataaagat
gtggtcgtagacctggtatgttacagacgtaacggccataatgagatggacgagccgatg
ttcacacagccgctgatgtacaaacagatcaagaagcagaaaggcgtcctgcagaagttt
gctgagaaagtcattgctgagggagtcatcacgatgcaagagtatgaggaggaagtagcg
agatacgacaaaatctgtgaggaggcctacgctcgctccaaagacgagaagatccttcac
atcaaacactggctggactcaccctggcctggttttttcaccctcgagggtcagcctaaa
agtatgaactgcccttcgactggcatcagcgaagaggagctcggccacatcggaaacatc
gccgcctctgttcctgttgaagatttcaccatacatggaggtttgagtcggatcctaaag
ggtcgcggcaacatggtgaatcagcgggtgtgcgactgggctctcggggagtatatggcc
tttggttctctgctcaaagaagggatccatgtgcgtctcagtggacaggatgtggagaga
ggcacattcagccaccgacaccacgttctccacgaccagaacgtggataagaggatctgc
atccccatgaactacatctcccctgaccaggctccgtacactgtctgcaacagctctctg
tctgaatatggagttctaggttttgaattaggcttcgccatggccagtcccaacgcgctg
gtcctgtgggaggcccagttcggagacttccacaacacggctcagtgcatcatcgaccag
ttcatcagctcgggccaggccaagtgggtcagacagaacggcatcgtgctgctgcttcct
cacggcatggagggaatgggtccagagcattcgtcggcccgtcctgaaaggtttctccag
atgtgcaacgatgacccagatgttttccctaaactgtcggaggactttgcagtgcgtcag
ctctacgactgtaactggatcgttgtcaactgctcgactcctgcaaactacttccacgtc
ctccgcagacagatcctgcagccgttcaggaagcctctgattgtgtttacacccaagtcg
ttgttgcgccaccctgaggccaagtccagctttgatgacatgctgccaggcacacacttc
aaacgaatcatcccagacgacggagctgcagcctccggcccagaaaaggtgaagagaatc
attttctgcaccgggaagatctactacgaactgacccgggaacgcaagaacagaggcatg
gacgaggctgtagctgtagtccgcatcgaacagctctcaccgttccccttcgacctggtg
aaagcagaaaccgatcgatacctgaacgctgatctggtttggtgtcaggaggagcacaag
aaccagggctactatgactacatcaagccccgcatccgcaccaccatcagccgcacccgc
cccgtctggtacgctggtcgtgatcctgcagcagctccggccaccgggaacaaacagact
cacctgatggagctgcagcgtttactggacacggcgttcgatctggaggcgttctcagga
aaagtttaa
DBGET
integrated database retrieval system
