Lates calcarifer (barramundi perch): 108895430
Help
Entry
108895430 CDS
T04895
Symbol
tnfrsfa
Name
(RefSeq) tumor necrosis factor receptor superfamily, member a
KO
K04722
tumor necrosis factor receptor superfamily member 10A/B
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
lcf04115
p53 signaling pathway
lcf04210
Apoptosis
lcf04217
Necroptosis
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108895430 (tnfrsfa)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108895430 (tnfrsfa)
04217 Necroptosis
108895430 (tnfrsfa)
04115 p53 signaling pathway
108895430 (tnfrsfa)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108895430 (tnfrsfa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
lcf04050
]
108895430 (tnfrsfa)
04090 CD molecules [BR:
lcf04090
]
108895430 (tnfrsfa)
Cytokine receptors [BR:
lcf04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
108895430 (tnfrsfa)
CD molecules [BR:
lcf04090
]
Proteins
108895430 (tnfrsfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
bCoV_NS7B
Motif
Other DBs
NCBI-GeneID:
108895430
NCBI-ProteinID:
XP_018549771
UniProt:
A0AAJ7Q8M1
LinkDB
All DBs
Position
LG9:17670439..17691665
Genome browser
AA seq
445 aa
AA seq
DB search
MNFDPVVGKLSVLVATLLIGLVCHGAEPPASQWSSDEYRNLTLRRPCVENEQYLHRGLCC
LNCQAGTFVHKPCERDQEPGNCLPCEHGQTYTEHSNGMNRCLPCTHCRSDEIETASCTTT
TDTKCRCKQGTFCVPDQACEVCKRCAKCKPGEEEVKKCTPFSNTVCRKRDPSPTETSPAL
PTQTPSSSADIVIPICILAIIFLILLIGLAVWWFVIRQNSCEIPCSKSHCDSGEIVKIPI
DESGATAEERQNNQNAGLEGEESRPESRPLLQETQGGITKPATLEDEDRGLGDSLPNTTS
SSQTSLSALPTAASSGNTPHQSPKACRQSAADMEDPLRHRLVPLQGSEKSLKKSFDLFDE
YLDVRIHNKFFRMIGVSDNHIRIAENGTPGDKVYELLKNWMQRQGLKADINDLLDTLLSM
DQRRSAEIIASTALQRGYYKHADTP
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgatccggtggtcgggaaactttctgtgttggtggcaacacttctcattggg
ctggtgtgtcacggagcagagcctccagcatctcagtggtccagcgatgaatacagaaac
ctcacccttcgtcgaccctgtgtggagaatgagcagtacctccaccggggactctgctgc
ctcaactgccaggctggaacctttgtgcataagccctgtgaaagagaccaagaaccaggg
aactgtcttccctgtgagcatggacagacttacacagagcactccaacggcatgaaccgc
tgtctgccctgtacccactgccgctcagatgagattgaaactgcatcctgcaccacaact
acggacaccaagtgccggtgcaaacagggcaccttctgtgtaccagatcaggcctgtgaa
gtctgcaaacgttgtgccaagtgtaaaccaggagaggaagaggtgaagaagtgcaccccc
ttttctaacacagtgtgtcgaaaacgagatccgtcccctactgaaacatccccagccctc
cccacacagaccccttcttcttcagcggacattgttatcccaatatgtattttggccatc
atcttcctcattcttcttattggactggctgtgtggtggtttgtgatcaggcagaattca
tgtgaaataccatgttcaaagagccattgtgattctggtgaaattgttaagattcctatt
gacgagagcggagccacagcagaggagagacagaacaaccagaatgcaggtctggaggga
gaggagtcccgcccggagtcacgacccctactgcaggagacccagggtgggataactaag
cctgctacccttgaagatgaggaccgagggctaggggacagtttgcccaacaccaccagt
tcgtctcaaactagcctgtcagccctgcccacagcagcctcctctggtaacaccccacac
cagagccccaaagcctgcagacagtcggctgcagacatggaagatcctctgcgacatcga
ttagtgccactacaaggctcagaaaaatccttaaagaagagctttgatttgtttgatgag
tacctggatgtgcggatccataacaagttcttcagaatgattggagtcagcgacaaccac
attcgaattgcagagaacggcacccctggtgacaaagtttacgaactgctgaagaactgg
atgcagcggcagggactaaaagctgacatcaacgacctgttggacactttgctaagtatg
gaccagcgacgctcagctgagatcatcgcctccacagccctgcagagaggctactacaag
cacgcagacactccctga
DBGET
integrated database retrieval system
