Lates calcarifer (barramundi perch): 108895806
Help
Entry
108895806 CDS
T04895
Name
(RefSeq) thrombomodulin-like
KO
K03907
thrombomodulin
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lcf04090
]
108895806
00535 Proteoglycans [BR:
lcf00535
]
108895806
04091 Lectins [BR:
lcf04091
]
108895806
CD molecules [BR:
lcf04090
]
Proteins
108895806
Proteoglycans [BR:
lcf00535
]
Cell surface proteoglycans
Others
108895806
Lectins [BR:
lcf04091
]
C-Type lectins
Others
108895806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
EGF_CA
Lectin_C
EGF_Tme5
EGF
THBD
EGF_3
hEGF
Motif
Other DBs
NCBI-GeneID:
108895806
NCBI-ProteinID:
XP_018550258
UniProt:
A0AAJ7VEW5
LinkDB
All DBs
Position
LG7_1:complement(19242640..19244857)
Genome browser
AA seq
552 aa
AA seq
DB search
MKDLTGLFVVVVLVFLSGGTVETVPDSGYCIVNQCFTVVQDPIDFTTARDQCRGQGGHLM
TVRSSVSHDVLYILLGNFTGQFWIGLHLLTGCPDAAAGLKGFQWVTKDNESDFFNWAPGF
DSSCSSHRCVSVSKESDFKWTQEPCGEQAAGFLCEFSFSEPCKSLAVTEGETVSYMTPMG
FGGEDMLSLPPGSIATRMPSESKYLCFSEQWLQAPWNCEILEGGCEHKCVENPKEAPSCY
CPAGQSVNPANNVTCDVVPDDPCAALGCEHACYKDGDSHVCICDHGFKLAADGRSCVDFN
DCTDQRQCPGENFRCINTVGGFQCVCKEGYSLSGSLCVDQDECASAPCEHMCDNTPGSYK
CSCYDGHIVDPKSPNKCKLHCGEEECDAQCDPNDVFQCYCPDGYVKEERDEGAFCIDIDE
CSFFYCDQGCVNTFGSYVCSCNPGFTLVGEYRCVKDDKGTVTDGGMGGKTAATTPDIPTT
PSIPPPDPTRQPSGVTVGGLVGIIVCTVFFIVLIVFLAHHFLNRGGKMESAGALKAHEDE
GHSLHRVTSDTS
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatctaacgggactgtttgttgttgtggtgttggttttcctgtcggggggaacc
gtcgagacagtgccggatagcggatactgcattgtgaaccagtgttttactgttgtccaa
gacccaatcgatttcacaacagcgcgggatcaatgcagaggtcagggtggtcacctaatg
acagtgcgctcatctgtatcacatgatgtcctttacatcttgttgggaaactttacggga
cagttctggatcggtttacatctcctgaccggctgcccagacgctgctgcggggctgaaa
ggcttccagtgggtgaccaaagataacgaaagtgacttcttcaattgggcgccaggtttt
gacagcagctgctcatctcatcgctgcgtctcagtttccaaagagagcgactttaaatgg
acccaagaaccatgtggcgagcaggcggccgggtttctctgtgagttcagcttcagtgag
ccgtgcaaaagtctggcggttacagagggcgagactgtctcctacatgacgccgatgggg
ttcggaggcgaggatatgctgtctctgccccccgggagcatcgccacccggatgccatcg
gagagtaaatacctctgcttctccgagcagtggctgcaggcgccctggaactgcgagata
ctcgaaggcgggtgcgagcacaaatgcgtggagaacccaaaggaggccccctcttgttac
tgccctgcgggacaaagcgtcaaccctgcgaacaatgtcacctgcgatgtggtaccagac
gacccgtgcgccgccctgggatgcgagcacgcttgctacaaggacggagactcccacgtg
tgcatatgcgaccacggctttaaactggccgcggacggcaggtcgtgcgtggatttcaac
gactgcacggaccaacggcagtgtcccggggaaaacttcaggtgcatcaacaccgtcgga
ggatttcagtgcgtctgcaaggagggttactcgctgagcggcagcctgtgcgtcgaccag
gacgagtgcgcgtccgcaccgtgcgagcacatgtgcgacaacactccgggtagctacaag
tgctcgtgctatgatggacatatagtggacccaaagtccccgaataaatgtaaacttcac
tgcggggaggaagaatgcgatgcgcagtgtgacccaaatgatgtgttccagtgctattgc
cctgatggttacgtaaaggaggaaagagacgagggggcattttgcatagacattgacgag
tgctcgttcttttattgtgatcagggctgtgtaaacacattcggcagctacgtgtgctcg
tgcaatccgggatttacgttagtcggcgaatacaggtgcgtaaaagacgataaaggtacg
gtcacagatggagggatgggaggcaagacagcggccaccactccagacatccccacaaca
ccgtctataccacctcctgatccaacaaggcagccctcgggggtgacagtggggggtctt
gttgggatcatagtgtgcactgtcttttttattgtgctgatagtttttttggcgcatcac
tttctcaaccgcggagggaagatggagagcgccggtgcgctcaaagctcatgaggatgag
ggtcacagtttacaccgtgtgacgagtgacacttcttga
DBGET
integrated database retrieval system
