Lates calcarifer (barramundi perch): 108896107
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Entry
108896107 CDS
T04895
Name
(RefSeq) isoleucine--tRNA ligase, mitochondrial isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108896107
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lcf01007
]
108896107
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcf03016
]
108896107
Enzymes [BR:
lcf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
108896107
Amino acid related enzymes [BR:
lcf01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108896107
Transfer RNA biogenesis [BR:
lcf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108896107
Prokaryotic type
Other AARSs
108896107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
108896107
NCBI-ProteinID:
XP_050933907
UniProt:
A0AAJ8BK02
LinkDB
All DBs
Position
LG19:3826478..3837726
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AA seq
1036 aa
AA seq
DB search
MLLCRVSAVSHALARWGRRSHLGGGLLHRALSFSSGRCHGVGSGESSAQPSETGSAQGLY
RDTVLLPRTEFPMKLTGQKLLDRELEIQKECGFADLYSWQRERKAKKEFCLHDGPPYANG
DPHVGHALNKILKDICNRFEMLRGRQVHYIPGWDCHGLPIELKALGELGTSGLSPLQIRQ
KAREFAEGAIARQKAAFQRWGVMADWDQCYYTFDGVYEAAQLKVFQEMHSKGLIYQDYKP
IFWSPSSRTALAEAELEYNPEHVSRAIYATFPLVRLPPKIASEKADLESVSVLVWTTQPW
TIPANEAVCYMPNAQYSVVKRADNSQLLLAATERIASMAALLGTELESVVTFTGSELEGG
ICKHPTIPDKEVPLLPANHVTMAKGTGMVHTAPAHGMDDYSVASQFKLPVECMVDEDGKF
NDLAGPELQSLPVMREGTDKVISMLRDCGALVKEEPCVHSYPYDWRTKQPVVIRPSKQWF
INTESLKDKAKEALQKVRVLPESAKGSLLVMLDRRTYWCISRQRSWGVPIPVFYHRDTGE
ALINKHTVSHIAKLFKEKNSDCWWELPIETLLPPEVLKQSKAGPVTDYIRGEDVLDIWFD
SGASWAAVLEEMEEDSEETEPRLSWLPAPLRKPLVTESDSRADAYVEGKDQIGGWFQSSL
LTSIAVRNKAPYKSLVVHGFAVSEKGEKMSKSLGNVVDPDTIINGGKDPSMPAYGADVLR
WWVAESNIFSEVQIGPTALNSARDSISKLRNTLKFLLGNLHGFDPLTQAVDPKEMHYIDQ
YMLHQLREYSIKVTDAYSEFDAGRVIRVLQAFISRDLSSFYFSIIKDRLYCDPEDSLGRR
SCQTVLEEVLDGVIRSIAPILPHLAEEVYLHAPGHDKGETLFKSGWIKSSSVWRRPGLEE
AVEGACAIRDSFLSSIPGKNAAQYDLTIAIEPGLLFELMESLQEEPSSTSSQLAELMMAA
RVNLTSELPRDLPPDAILNHGTFLINLEGGVIREDSAYNIAVVPTSASRCPRCRRYTAES
ADCMCPRCQAVVSQAH
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtgccgggtttcagcagtcagccatgcgcttgcgagatggggacggaggtca
cacctgggaggcggcctcctccaccgtgctctctccttcagctccggccgctgtcatggt
gtcggttcaggagaaagcagcgctcagccgtcagagaccggttctgctcagggactgtat
cgagacacagtgctccttcctcggactgagttcccgatgaaactgaccggacagaagctg
ctggaccgagaactggagatacagaaggagtgtggatttgcagatttgtactcttggcag
agagagaggaaggccaagaaggagttctgtcttcatgatggacccccatatgctaatggg
gaccctcatgtgggacatgcactcaataagatcctaaaggacatctgtaaccggtttgaa
atgctgagagggcgacaggtccactacatcccaggctgggactgccatggcctgcccatc
gagctgaaggctctcggagagctggggaccagcggcctcagtccgctacagatcagacag
aaagcacgggagtttgcagagggggccatagcgcgtcagaaggctgctttccagcgctgg
ggggtgatggctgactgggaccagtgctattacacttttgatggggtctatgaggctgct
cagctgaaagttttccaggaaatgcacagcaaggggctcatttaccaggactataagcca
atcttctggtctccttcgtcaagaacggccctggcagaggcagagctggagtacaaccct
gagcatgtgagcagagccatttatgccacctttcctttggtcaggctgccacctaagata
gcttcagaaaaagcagatctggaaagtgtctctgtgttagtgtggaccacccagccttgg
accattcctgccaacgaggctgtatgctacatgcccaatgcccagtattcggtggtgaaa
agggctgacaactctcaactgctgctggcggccactgagcgtatagctagcatggcagca
ctgctgggcacagagctggagagtgtagttacctttacaggatctgaacttgaaggtggg
atctgcaaacaccccacaattcctgacaaggaagtgccactattgccagccaatcatgtg
actatggcgaagggaacgggaatggtccacacagcaccagctcacggcatggatgattac
agtgtggcttcacagtttaaactgcctgtggagtgtatggtggatgaggacggtaagttc
aatgacctagctggccctgagctacagagcctgcctgtgatgagagaaggcactgacaaa
gtgatttccatgctgagggattgtggggcattggtgaaagaggagccatgtgtccatagc
tacccatatgactggaggacaaagcagcctgttgtcatcaggcccagtaagcagtggttc
atcaacacagaatcactcaaagacaaagccaaggaggcgctgcagaaggtacgtgttttg
ccagagtcggctaagggcagcctgctggtcatgctggacagacggacgtactggtgcatc
tccagacagcgaagctggggcgtcccaatccctgtcttctaccacagagatactggagag
gctctcatcaacaaacacacagtgtctcacatagcaaagctcttcaaagaaaagaacagt
gactgttggtgggagcttcctattgagactttgctgccaccagaggtcctcaagcagagt
aaagcaggtccagtgactgactacattcgtggagaggatgtgctggacatctggtttgac
agcggagcatcgtgggctgctgtactagaagagatggaggaggattccgaggagactgag
ccacgtctcagctggcttcccgctccactacgcaaacctctggtcacagagtcagactcc
agggcagatgcatatgtggagggaaaggaccagattggaggctggtttcagtcgtcactg
ctcaccagtatagcagtcaggaacaaggcaccttacaagtctctggtggtccatggcttt
gctgtcagtgagaagggagaaaagatgtccaagtctctgggcaatgttgtggatcctgat
acaatcattaatggagggaaggacccaagtatgccagcctacggggcagacgtgctgcgt
tggtgggtagcagagtcaaacatattctctgaggtccagattgggccaactgcactcaac
tcagccagagacagcatcagcaagttaaggaacacgctgaagttcctgctcggcaacctg
catggcttcgacccacttactcaggctgtggaccccaaagagatgcactacatcgatcag
tacatgctgcaccagctccgtgaatacagcataaaggttacagacgcctacagtgagttt
gatgccggcagggtcatccgtgtcctccaagccttcatcagcagagacctctccagtttt
tacttcagcatcatcaaagacaggttgtactgtgatccagaggactctctgggcagaaga
tcgtgtcagactgttttagaggaagttctggacggagtaatcagatccatagctcccatc
ctgccacatctagctgaagaggtctacctacatgcaccaggacatgacaaaggggagaca
ttattcaagagtggctggataaaaagcagttctgtgtggcggcgcccaggattggaggag
gcagtggaaggagcatgtgccatcagagactcgttcctgtcttctattcccgggaaaaat
gccgcccagtatgacctcactattgccattgaacctggtctactgtttgaactcatggag
tctctccaagaggagccttcctccacctcctcccagctggctgagctgatgatggcagcg
cgggtcaacctgaccagtgagctgccccgtgacctgcccccagatgccatactgaaccac
ggcaccttcctcatcaacctagagggtggtgttatccgtgaggacagtgcctacaatata
gcagtggtgcccacctctgctagccggtgcccacggtgccggcgatacactgctgagtca
gcagactgcatgtgcccacgctgccaggccgtcgtttcacaggctcactga
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