Lates calcarifer (barramundi perch): 108897019
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Entry
108897019 CDS
T04895
Name
(RefSeq) interleukin-1 receptor type 1
KO
K04386
interleukin 1 receptor type I
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108897019
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108897019
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
lcf04050
]
108897019
04090 CD molecules [BR:
lcf04090
]
108897019
Cytokine receptors [BR:
lcf04050
]
Interleukin receptor families
IL1 receptor family
108897019
CD molecules [BR:
lcf04090
]
Proteins
108897019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
TIR
ig
I-set
V-set
Ig_2
TIR_2
Ig_6
DUF2631
Motif
Other DBs
NCBI-GeneID:
108897019
NCBI-ProteinID:
XP_050925403
UniProt:
A0AAJ8B521
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Position
LG1:complement(6368424..6385887)
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AA seq
589 aa
AA seq
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MLGLAKQYNTLWRQEEGKPSGSSSPAPKFNMRTMAVAGWVCLLATLLSLAFAVAHNHSGE
TDTYYVSAGHLFLLRCHIADTHTRVTWSIAGSHNPSLPSGVKVRNGLLWFLPVQTSHGGD
YTCEKRDETGLSKMKFTVSVFNGECPDPPETVSITLGNSRELPCKQTEIFKQKNKSNIRW
MKDCHQMKPIFVDDMTGDMRLHKVSEKDAGKYTCLVDINVDGRMYTAARSIQLTINTYVF
LTLADPPPVEPELVYPQNDVVTVEVGKRAELKCIAYVGLGEDSDTLMYWTVDGTDSEEHE
ELKESRQFTPEKDRVFGLSILSISKVHRRFLNVPIKCTVSSSVASKFGWVLLQEADHSAF
YASVALCLAASLTILVLASAFLFFKVEVVLAYRKLSRHFSKQAPDGKLYDGYVSFLHPDT
LSSDEMATFALQILPEELEKKHGYSLYIRGRDDCPGEAVPDVIASTMRQCRRLIIILSPE
AKSSADNKTEEESLLCNQSQLGYEQKIGIHDALTQNDLQVILVEIGGPVDYSCLPESLHY
IKKKQGALKWRKASLGTQKLTTLRSNRNFWKNLRYHMPSLPAARHQTIV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgctggggttagcgaagcagtataatacgttgtggagacaggaggaaggaaaacccagc
ggctcaagctcaccagcacccaagtttaatatgagaaccatggcagtggcaggctgggtc
tgcttgttggctacactgctgtctctggcatttgctgtggcacacaaccacagtggggag
acagacacctactatgtgagtgccggacacctatttttgctgaggtgccacattgctgat
acacacactagagtgacatggagcatagcagggagccacaacccaagcctgccctctgga
gtgaaagtcaggaatgggttactgtggtttctacctgtacagacttcccatggtggtgac
tacacctgtgagaaaagggatgagactggattatcaaagatgaaatttacagtgtctgtg
ttcaatggagagtgtcctgatccacccgagactgtatccataaccctgggaaacagtaga
gaacttccttgcaaacagacagaaattttcaaacagaaaaacaaaagcaacatacgatgg
atgaaggactgccaccaaatgaagcccatctttgtggatgatatgaccggtgacatgagg
ctgcataaagtctcagagaaggatgctgggaaatacacctgtttggtagacattaatgtg
gatggcaggatgtataccgctgcacgcagcatccagctaactattaacacttatgtgttt
ttaacccttgcagatccacctcctgtagaacctgagctggtgtaccctcagaatgacgtg
gtcactgttgaagtgggtaagagagcagagctgaagtgcatagcctacgtaggccttgga
gaggacagtgacacactcatgtattggactgttgacgggactgatagtgaggagcatgag
gaactcaaggagtcccggcagtttactcctgaaaaggacagggtgtttggtctgtccatt
ctgtccatctccaaagttcatcgtaggtttctgaatgtaccaatcaaatgcaccgtgagc
agctcagttgcaagcaaatttggctgggttttgcttcaagaagctgaccacagtgccttc
tatgccagtgttgctctctgccttgctgcctctttgactattctggtcctggcttcagcc
ttcctcttctttaaagtagaagtggtgttggcctataggaaactgtcaagacatttttcc
aaacaagctccagatgggaagctctacgatggctatgtgagcttccttcatcccgacacc
ctgagttcagatgagatggcgacttttgccctgcagatccttcctgaggaactggagaaa
aaacatggctactccctgtacatcagaggacgggatgactgccctggagaagctgtgcct
gatgtcattgcttctacaatgcgccagtgtcgcagactgataatcatactgtcacctgag
gcaaaatcttctgctgacaacaaaacagaggaagaatcactcttgtgtaatcaaagccag
ctgggatatgaacagaaaattggcattcatgatgctttgacccagaacgacctccaagtg
attctggtggaaattggtggtccagtggattacagttgcctgccagagtctcttcactat
atcaaaaagaaacaaggagctctgaagtggcggaaagcctctcttggaacccaaaaactc
accacattacgctcaaacagaaacttttggaagaatctgaggtaccacatgccttcacta
cctgcagcaagacaccagactattgtctaa
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