Lates calcarifer (barramundi perch): 108897040
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Entry
108897040 CDS
T04895
Name
(RefSeq) radixin isoform X1
KO
K05762
radixin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04530
Tight junction
lcf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108897040
09142 Cell motility
04810 Regulation of actin cytoskeleton
108897040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108897040
04147 Exosome [BR:
lcf04147
]
108897040
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Ezrin/Radixin/Moesin
108897040
Exosome [BR:
lcf04147
]
Exosomal proteins
Proteins found in most exosomes
108897040
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ERM_C
FERM_M
ERM_helical
FERM_C
FERM_N
Motif
Other DBs
NCBI-GeneID:
108897040
NCBI-ProteinID:
XP_018551933
UniProt:
A0A4W6DTZ4
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All DBs
Position
LG1:6285834..6320950
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AA seq
572 aa
AA seq
DB search
MPKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYTDSKGYVTWLK
LNKKVTQQDVKKENPLQFKFRAKFFPEDVSEELIQEITQKLFFLQVKEAILNDENYCPPE
TAVLLASYAVQAKYGDYNKDIHKPGYLASDRLLPQRVLEQHKLTKEQWEDRIQTWHEEHR
SMLREDAMMEYLKIAQDLEMYGVNYFEIKNKKGTELWLGVDALGLNIYEHEDKLSPKIGF
PWSEIRNISFSDKKFVIKPIDKKAPDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTI
EVQQMKAQAREEKHHKQMERAQLENEKKKREHAEKEKERIEREKDELIERLRQIEEQTQR
AQKELEEQTRKALELEQERKRAKEEAERLERERQAAEEAKASLAQQAADQMKNHEQLAAE
LAEFTAKIALLEEAKRKKEEEATEWQHKALSAQEDLEKTREELKTAMTSPPAPEHDEQDE
TNAEASAELLSDGVTSHRSEEERITEAQKNERVKKQLQALSSELAQARDDTKKTQNDMLH
AENVRAGRDKYKTLRQIRQGNTKQRIDEFESM
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagccgatcaatgtgcgtgtcaccaccatggatgctgagctggagtttgccatt
cagcccaacacaacaggcaaacagctctttgaccaggtggtgaagacagtgggtttaagg
gaggtctggttctttggcctacagtacacagacagtaaaggctacgtgacatggctcaag
ctcaacaagaaggtgacccagcaagatgtgaagaaggagaatccgctgcagttcaagttc
agagcaaagttctttccagaggatgtttctgaggaactcatccaggagatcacacagaaa
ctcttcttcctgcaggtgaaggaggccattctgaatgatgagaactactgtcccccagag
acagctgtgctgctggcctcctacgctgtccaggccaagtatggtgattacaacaaagat
attcacaagcctggctacctggcctccgaccgactactgccacaaagagttcttgagcaa
cacaagctgacaaaggaacagtgggaggacagaatacagacctggcatgaggagcacaga
agcatgctcagagaggatgcaatgatggaatatcttaagattgctcaggacctggagatg
tacggtgtcaactactttgaaattaaaaacaagaagggcacagagctgtggcttggggtc
gacgccttggggctcaacatctatgaacatgaagacaagttgtcaccaaagatcggcttc
ccctggagcgaaatcagaaacatttccttcagtgacaagaagtttgttatcaagcccatt
gataagaaagcaccagattttgtgttctacgcccctcggttgcggatcaacaagcgcatc
ctggcgttatgtatgggaaaccatgagctgtacatgaggaggaggaagcctgacactatt
gaggtgcagcagatgaaggctcaggccagggaggaaaaacaccataaacagatggagaga
gcgcagctggagaatgagaagaagaagcgtgagcacgcagaaaaggaaaaggagcggata
gagcgagagaaggatgagttgatcgaaaggctgaggcagattgaagagcagacacagaga
gctcagaaagaacttgaagagcagactcgcaaagcgctggagctggagcaggaaaggaag
cgagcaaaggaggaggcagagcgtttggagagggagaggcaggcagcggaggaggccaag
gcgtcgctggctcagcaggctgctgatcagatgaagaatcatgaacaactggctgctgag
ttagcggagttcactgccaaaattgccctgcttgaagaggcaaagaggaaaaaagaagag
gaagcaacagaatggcaacacaaagctctgtcagcacaagaggacctggagaaaaccagg
gaggagctgaagacagccatgacgtctccaccagcaccagagcatgatgagcaggatgaa
acgaacgctgaggcgagcgctgagctgctcagtgatggcgtcaccagccaccgtagtgaa
gaggaacgcatcactgaggcacagaagaacgaacgtgtcaagaaacagctgcaggctctg
agttcagaattggcccaggcccgggacgacactaagaaaacgcaaaacgacatgctgcac
gctgagaacgtcagggcaggaagagacaagtacaaaaccctgcgccagatccgccagggt
aacacgaagcagcgcattgatgagtttgagtccatgtga
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