KEGG   Lates calcarifer (barramundi perch): 108897322
Entry
108897322         CDS       T04895                                 
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108897322
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcf03041]
    108897322
Spliceosome [BR:lcf03041]
 Complex A
  U2 snRNP components
   U2 related factors
    108897322
 Complex B
    108897322
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    108897322
SSDB
Motif
Pfam: SMN_Tudor TUDOR PUA_4 DUF2730
Other DBs
NCBI-GeneID: 108897322
NCBI-ProteinID: XP_018552409
UniProt: A0A4W6D7R9
LinkDB
Position
LG16_LG22:complement(11024077..11028216)
AA seq 238 aa
MSDDLVKQLSSYKAQLQQVEVALSTDPDNEDLLKLQKDLQEVIDLTKDLLTSQPSDGASS
TNGSDTVPLKHGWKVGDRCMAVWSQDGQVYEAEIEEIDRENGTAAVTFSGYGNAEIIPLQ
NLKPAEEGKRSEEDGSVKPKSKKEQIAEQREYKKKKAQKKVQRMKELEQEREEQKSKWQQ
FNNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYHDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcggacgacttggtgaaacagttaagcagctacaaagcccagctgcagcaagtagaa
gttgccctatctactgacccagataatgaagacctcctaaaacttcaaaaagacttgcag
gaagttattgatttgacaaaagacctcctgacctcacagcccagtgatggggcctccagt
actaatggctcagacacagttcccttgaagcacggctggaaagtgggggacaggtgtatg
gctgtgtggagtcaggacggacaggtgtatgaggctgagattgaggagatagaccgagag
aacggcactgcagccgtcaccttcagtggatacggaaacgccgaaatcatccccctgcag
aacctcaaaccagcagaggaggggaaacgttctgaagaggatgggagtgtcaagccaaaa
tcaaagaaagagcaaatagcagagcagagagagtataagaagaagaaagcccagaagaag
gtacagaggatgaaggagttggagcaagagagggaagaacagaagtccaagtggcaacag
ttcaacaacaaagcctactcaaagaacaagaaaggacaggtaaagaggagcatatttgca
tctccagaaagtgtaaatggaaaggtgggcgtgggaacatgtggtattgcagataagcct
atgacccagtaccatgacacatcaaaatacaatgttagacatttaatgccccaatga

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