Lates calcarifer (barramundi perch): 108897369
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Entry
108897369 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: protein FAM149B1
KO
K24653
primary cilium assembly protein FAM149
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108897369
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
108897369
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3719
TSP_Ig-like
YliH
Motif
Other DBs
NCBI-GeneID:
108897369
NCBI-ProteinID:
XP_018552465
UniProt:
A0AAJ7QC91
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Position
LG16_LG22:12595153..12605239
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AA seq
682 aa
AA seq
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MISRYNRRPVSHKLEIRGLSRSSLDHHPLPEEADDNQTPQRYLHDLQEAVSTHNSSETSA
ASGHSDCPTVISVDSNQSWSGIHSSTGTGISTERSSVFSWGYDEFDKAASRQVQQMFEEI
DKELYEGKGSGGGILQGLQDECQQWATRFPHLRILGTQLVYPSDEGFQWYATSGKSSSAS
SPSAGKESSVKSQEKDKTGTELNVQGRRAALIRSSSAELDGPPGTSSGSGSHYKPRVIEV
EGLMEEYLAFDSRDLEDEWEQDCSESGRRHHSLPPVSPYRCRRQAVLDLLFDDVWRQLVG
WMKELVQRHWECCTSNDEKISGNLNPVQQDSQNPFMLLSTLPTMLPKLGQSRVPPLTAGL
QFQNTKSRGSKHKSRRKSKKQKRPSTAGRVPVGAVATQHNLNDLIVIHSIPLQQRNLGVL
DRNQEPEERPSHRPGSSAVPSSKPRPRRTLEQSSSSLSRPPQSARRRNPPPRTLLPLVPS
LSQSSTAGSMDEVIRGTRLPTASDRLTSPLLPLSRNTLLPPISTGDPDSSHSGQQSKPAQ
RQKGPSSRAHSAINDEAGSTIPRDRHHLLDVFSRPNTTHTYRSDTPYRRSFTVLDNIGQG
RPGRASVGTDSLGIGVTGVSLGISSSSFLDSFSHHPLGHSPIKDEEEPDPQAPVPAPLVP
VSVPPRSYTRGGISSRASRPGL
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgatttcacgatacaacaggagacctgtatcgcacaaacttgagatccgtgggttgtct
cgaagcagcctcgaccaccaccctctcccagaggaagcagacgataatcaaacccctcag
cgctacctccatgacctccaggaagctgtctccactcacaacagctcagagacatctgct
gcctcaggccactctgactgtcccaccgtcatctcagtagactccaaccagtcctggtca
ggtatccacagctccacaggcactggtatatccacagagaggagctctgttttctcctgg
ggctatgatgagttcgacaaggcagcgtcgcgacaggtgcagcaaatgtttgaggagatc
gacaaagagctgtacgaggggaaaggcagtggaggcgggatactccaggggctgcaggat
gaatgtcagcagtgggccacacgtttcccacatcttcgaatcctggggactcagctggtg
tatcccagtgatgagggcttccagtggtacgctacttcagggaaaagcagctctgccagc
agcccatcagcaggcaaagagagcagcgtgaagtcccaggagaaagataagactggcaca
gagttgaatgtgcagggccggagagcggcactgatcaggtcctcctcagcagagctggat
gggccccctggcacctccagtggctccggcagtcattacaagccgagagtgattgaagtg
gagggtctgatggaggaatacctggcttttgatagcagggacttggaagatgagtgggag
caggattgttcagagtcgggtcggaggcatcactccctgccccccgtctcaccataccgg
tgtcgccgccaggctgttcttgacctgctctttgatgacgtgtggcggcagctggttggc
tggatgaaagagctagttcaacgccactgggaatgctgcacctcaaatgatgaaaagatt
tctgggaacttgaaccctgtgcagcaagactcccagaatcccttcatgctgctctctacg
ttgcccaccatgctgcccaaacttggccagagcagggtgcccccactcacagctggcctg
cagttccagaacacaaagtcaaggggctcaaagcacaagtccagacggaaatccaaaaag
cagaaaaggccgtccactgctggaagggtcccagttggagcagtggcaactcagcacaac
ctgaacgacctcatcgtgatccacagcatccccctgcagcagaggaacctgggtgtgctg
gatagaaaccaggagccagaggagcggccatcccacagaccgggctccagcgcggtcccc
tccagcaaacctcgccctcgccgaaccctggagcagagctcttcctcgctgtcccgcccg
ccgcagtcggctcgacgcagaaaccctcctccgcgtacgctcctgccattggttcccagc
ctgagtcagtccagcacagcgggatccatggatgaggtcatccgcgggacacgtctaccc
acagccagtgaccgcctgacatctccgctgttgcctctgagcagaaacacactccttccc
cccatcagcaccggggacccagattcatctcactcagggcagcagtccaaacctgcacag
cgccagaaaggcccatccagtcgcgcccacagtgctataaatgacgaagctggcagtaca
ataccaagggatcgtcaccacctactggatgtcttctctcgccccaacaccactcacaca
tacaggtccgacactccgtaccgtcgttccttcacagtattggacaacatagggcagggg
cggccaggcagagcctctgtgggcacagactctcttggaattggcgtgaccggcgtcagt
cttggcatcagcagctcatctttcttggactcgttttcccatcaccccctgggacactcg
cccatcaaagacgaagaggaaccagacccacaagcccctgtcccagctccactggtgcct
gtgtcagtcccacctcggtcttacacccggggaggcatctcatccagagccagcagacct
ggcttatag
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