Lates calcarifer (barramundi perch): 108897717
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Entry
108897717 CDS
T04895
Symbol
ntrk3b
Name
(RefSeq) NT-3 growth factor receptor isoform X1
KO
K05101
neurotrophic tyrosine kinase, receptor type 3 [EC:
2.7.10.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108897717 (ntrk3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108897717 (ntrk3b)
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
108897717 (ntrk3b)
Protein kinases [BR:
lcf01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
108897717 (ntrk3b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRRCT_2
I-set
Ig_3
LRR_8
ig
Ig_2
C2-set_2
LRR_4
LRR_5
C2-set_3
TrkA_TMD
Haspin_kinase
LRRNT
Motif
Other DBs
NCBI-GeneID:
108897717
NCBI-ProteinID:
XP_018552979
UniProt:
A0A4W6G3S1
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All DBs
Position
LG2:complement(19585552..19750867)
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AA seq
818 aa
AA seq
DB search
MDLWFHSIRICWWRVLFLMSVFQDYLSSMLDCPPTCSCSQTEIYCNKSDNGRFFPLLALQ
DTGNNGTSVDIAELFKNITSIHIENWTGLQTLRDVDMELYTGLQRLTIMNCNLRVIQARA
FAQNPHLRYINLSKNPLTTLSWQLFQHLQLSELRLDGVVFDCGCDIRWIQLWQQRGEASL
HTQQLYCRNGASKIRLHNMYIHNCDLPEISVSHSSVLVMEGDNVTVSCNGSGSPLPEVDW
TVSGLHSINTHLSNVYWPNIHSINLTLFNISRDDNNFQLTCIAENVVGMTNSSIQLNVQF
PPVILRLAEPEQRLHTCIEFTVRGYPHPKLRWFYKQKEILQNDYIRTEMDFYQDYLEGCL
TFQNPTHINNGNYTLEASNPLGTVTKTVYGHFLTEPGIIDEEIVELVTSTPSYGSGRPDE
DTFGVSIAVGLAGFACVLLLVLFVLINKYGRRSKFGMKGPVAVISGEEDSASPLHHVNHG
IITPCTLDAGPDAVVIGMTRIPVVENPQYFRHGHNCNKPTTLVQHIKRRDIILKRELGEG
AFGKVFLAECYNLSPTKDKMLVAVKTLKDPNLSARKDFQREAELLTNLQHDHIVKFYGVC
VDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPLQSNGELGLSQMLHIATQIASGM
VYLASQHFVHRDLATRNCLVGNGLLVKIGDFGMSRDIYSSDYYRVGGHTMLPIRWMPPES
IMYRKFSTESDVWSFGVILWEIFTYGKQPWFQLGNNEVIECITQGRVLERPRICPKEVYD
IMLGCWQREPQQRLNIKDIQKVLFAMGKATPVYLDILG
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggatctatggtttcattcgatccggatttgctggtggagggttttgtttctgatgagt
gttttccaggactatctgagctccatgctggactgcccgccgacctgcagctgctctcaa
acagagatctattgcaataagtccgacaacggcaggtttttccctttgctcgccctgcaa
gatactgggaacaatgggaccagtgttgacatagcggagttgttcaaaaacatcacctct
atacacatagagaactggacgggattgcagactctgagagacgtcgatatggagctctac
actggactgcagagactaactatcatgaattgcaacctgagggtgatccaggctcgcgcg
ttcgctcagaacccacacctacgctacataaacttgtcaaagaatcctctcaccactctg
tcatggcagctcttccagcacctccaactctccgagctgcgtctggacggtgtggtgttt
gactgcggttgtgatatccgctggatccagctgtggcagcagagaggagaggccagcctc
cacacgcagcagctgtactgcagaaatggagcctccaagatacgactgcataacatgtac
atccacaactgtgacttaccggagatcagtgtgagccacagcagtgtgctggtgatggag
ggcgacaatgtgactgtgagctgcaatggatccggatcaccgctgcctgaagtggactgg
actgtcagcggcctacactccatcaacacacacctgtctaatgtgtactggcccaacatc
cactccatcaatctgaccctcttcaacatcagtcgcgatgacaacaacttccagctgacc
tgcattgcagagaacgtggtggggatgaccaactcctccatccagctcaacgtacagttt
cctccagtcatcctgagactggctgagcctgagcagcgcctccatacctgcattgagttc
acggttcggggttacccccaccccaagctgcgttggttctacaagcagaaggagatcctt
cagaacgactacatccgaactgagatggacttctaccaggactatctggagggctgtctg
accttccagaacccgacacacatcaacaacggcaactacactctggaggccagcaacccc
ctgggaacagtcaccaagactgtgtatggtcacttcctcacagaaccgggcatcatagac
gaagaaatagtggaactagttacttcgacgccatcatatggttcaggccgaccagatgaa
gatacattcggggtttccatcgctgttggcttggcgggcttcgcttgcgtcctcctcctg
gtcctttttgttctcatcaacaaatacggccggcgctccaaattcggtatgaaaggtcca
gtagctgtgatcagtggtgaggaagactctgccagccctcttcatcatgtcaaccatggg
attataaccccctgtactctggatgcgggtcctgatgctgttgttatagggatgactcgt
attcctgtagtggagaatcctcaatacttcagacatggacacaactgcaacaagccaaca
acccttgtccagcatataaagcgaagagacatcatcctgaagagggagttgggtgaggga
gcattcgggaaagtcttcctggcagagtgttacaacctgagccccaccaaggacaagatg
ctggtggctgtcaagacactgaaagatcccaacctgtcagcaaggaaggatttccagagg
gaggcagagctgctgaccaacctgcagcacgaccacattgttaaattctatggagtgtgt
gtagacggagaccctctcatcatggtgttcgaatacatgaagcacggagacctcaacaaa
ttcctcagagcccacggcccagacgccatgatcctggtagacggccagccactgcagtcc
aacggagagctgggcctttcccagatgctgcacattgccacgcagattgcctcaggcatg
gtctacctggcctctcagcactttgtccacagggatctggcaacccgcaattgtctggtg
ggcaacggcctgctggtcaagattggagactttggcatgtccagggacatctacagcagc
gactactacagggttggaggacataccatgctacccattcgctggatgcccccagagagc
atcatgtacaggaaattctccacagaaagcgacgtctggagctttggagtcatcctttgg
gagatctttacctatgggaagcagccatggtttcagctgggtaacaacgaggttattgag
tgcataacccagggtcgggttctggagaggccacggatttgtcctaaggaggtgtatgac
atcatgctgggctgctggcagagggaaccgcagcagcgactgaacattaaggatattcag
aaggtcctgtttgccatgggaaaagccacgccggtctacctggacatcctgggctag
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