Lates calcarifer (barramundi perch): 108898093
Help
Entry
108898093 CDS
T04895
Name
(RefSeq) beta-1,3-galactosyltransferase 4
KO
K00715
ganglioside galactosyltransferase [EC:
2.4.1.62
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
lcf00604
Glycosphingolipid biosynthesis - ganglio series
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
108898093
00604 Glycosphingolipid biosynthesis - ganglio series
108898093
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108898093
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.62 ganglioside galactosyltransferase
108898093
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
Glycolipid
108898093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
Motif
Other DBs
NCBI-GeneID:
108898093
NCBI-ProteinID:
XP_018553475
UniProt:
A0AAJ7QE15
LinkDB
All DBs
Position
LG6:complement(17949484..17953790)
Genome browser
AA seq
371 aa
AA seq
DB search
MVGRGLWVCKPRFGKRGSRLGVLPFLCAAAASAALLALLFVDFIESWVTSMSMNTVVEPH
AGIIPPQSVPPTRPEEFLLMPSPLVCQRAKPYLITMVTTAPANQRARQAIRDTWGGEVEV
RGLRVMTLFMVGVASDPGLAKLLIEEARERGDLIQGRFLDSYSNLTLKTLSMLGWARRFC
PQAHFMAKVDDDVLFNPSALLHFLNKSRNPYEQGDLYLGRVHLHVAPDRDPDSKHYLPAG
AYPPSVFPDYCSGTAYVLSRSALLKISLAASASPLSTPLPPEDVFVGLCARAAGVLPSHC
PLFSGGPAVPYGRCCYQAMVSIHHIPPREMLHFWADIHSSPPCSWLSLRASLGMCKVRAM
LGEAFGLEQGL
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggtcggacgcggactatgggtatgtaagccccggttcgggaagcgagggagcaggctc
ggggttttgccttttctgtgcgcggcggcagccagcgcagccctgctcgctctgctcttt
gtggacttcatcgagtcatgggtcacctccatgagcatgaacacggtggtggagccgcac
gccggtatcatccccccgcagagcgtcccccccaccagacccgaggagttcctgctcatg
cccagcccgctcgtgtgccaacgcgccaaaccttacctcatcaccatggttacgacggcc
cctgccaatcagagggcccgccaagccatcagagacacctggggaggggaggtggaggtg
aggggcctgcgggtcatgaccctcttcatggtgggcgtggcgtctgacccgggactggcc
aagctgctgatagaggaggcccgggagagaggagatctgattcaagggcgttttttggac
tcctactccaacctcaccctgaagaccctgtccatgctgggctgggcccgccgcttctgc
cctcaggctcactttatggccaaagtggatgatgatgttctgttcaatcccagcgccctc
ctgcacttcctgaacaagagccgtaacccctatgaacaaggagacttgtaccttggcaga
gtgcatctccatgtggctccggaccgtgacccggatagcaagcactacctccctgcaggg
gcctaccctccctctgtctttccagactattgcagtggtacagcctacgtcctgtcccgt
tctgcattgctcaaaatctccctggcagcctctgcctcacccttatccacacctctaccc
cccgaggatgtctttgtcggcctgtgtgctcgggcagctggggtgctgccctcacactgc
cccctcttctctggtggtccggctgttccctacgggcgctgctgctatcaggccatggta
tccatccaccacatcccgcccagagagatgctgcacttctgggctgacattcactcatct
cccccctgctcttggctgagtctacgtgcgtccctggggatgtgcaaagtcagggcgatg
cttggggaagccttcgggctggagcagggattgtga
DBGET
integrated database retrieval system
