Lates calcarifer (barramundi perch): 108898494
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Entry
108898494 CDS
T04895
Symbol
prr12b
Name
(RefSeq) proline-rich protein 12 isoform X1
KO
K28428
proline-rich protein 12
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108898494 (prr12b)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
108898494 (prr12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4211
Motif
Other DBs
NCBI-GeneID:
108898494
NCBI-ProteinID:
XP_050929784
UniProt:
A0A4W6E1H3
LinkDB
All DBs
Position
LG11:22656609..22686453
Genome browser
AA seq
2844 aa
AA seq
DB search
MERNYPAAGFGDLGAGTGWSYDRSAKASLVYGTSRSSHPDSELLHRQAYGTPHPLQGYAT
NHHPGGSRQGGAWGSAGRTLGLSGLFDASLHHASPSGPDPSVMNLISALESRGPQPPPSA
SSLLSQFRTPSWQTAMHTPAPPELFISGALPGSSSFPSSSALSAYQHPGSFSGRSFTPSL
SLQDAPPFSPTSNGLLSPPDPLLHIKTPSQSSLGFDRLLSSQSATYRGSQEPSGPSQTQA
PSTSSSCHLPPPQFNLLSSQLHNQSSQLYNASMFSSTPALPPAAPPQPPPPPERAVSRQD
SVIKHYQRSSPAQSTPLPLQQYVSCGGSSGYQQIGSHPRHAGVSCSPLGEQSPSSDPKPS
PRMESQTYRPIIQTPYTSSSSSSSASSSSGTKGAKSSSSSSGYSSSGSASSSRTPHTPPS
ASSTSSSSSSSSKTSAGSLSAPSRQQPPPQSVPAPPPLPVVSSSLVQQSAPKQCLSTYGS
PSVANSSTGLPDQTPPKQHTQSYSPNQPPSAHMGQSYGGFSSPHAQDLSSGAGGIGGKAF
TGIGTGGRSFSAEIVFGDSSFGSASLRRAGSPPLGFGNAGGSTGSGPVSGPAGSAGSGSG
AASVGNGGSSSYHLPESSPSPSIGSISRPGLHSPAAARPAQSPGGSGASKYLSSILSPAF
MPSPQGFPDTRQAQSQSYHSSPPKPKTETNMLGVERSQDEEDDDEDFLIHHLLHAQSSTP
HPSQHHSLPQQLPQPLPQARDGESKGVAYDMNKISEERYHLQSVIRTNNTTSSSGPDAAS
GLNSQLEIPQKKQQQAKSELTISKSTAGGVGVVTDSLSHSHTTHSHQQQHDSMGSVVHYG
RGDPYAQHSHSQHSHHTSHVSSLSQQHPQHSQIPPHTQHTQHSQHSQHGHPHSHSHSHPH
MELKKTSDANENAYLCNTPDVQQTRQTQVPLSLMDSPPDQTHMLQSVLSHTTRSKMDPQP
SQQQQQQQHALSQQAMMGSAGGAGPAGVESHPQNQSSQLQLQLQTQGIDTHYSIAAQSRD
QTRASQNSVSPLDMLDQSLSRTNGRDSGGALDRTVVGVSVTGGEGGGGDRHRQQHRLTPH
HLPQQTASDLHDFLSEPDLGLSTPSHLHHLNQPQAHAHPHTHHQQQAHTHHQLSHAQLAH
PHPHRMAANMGNPQQQRQPQQREPESQLSHSQLDQLKQHQFDTVSPVGKVVQNQAQQQRF
APLTSICFPDSLLHDEDRSFFPEMEDMFCSAEYKSSCAGDSGAGQAAQESLTQSHGQGQE
GMEVLKTGGAGEGYDMVSHHSDQGYGQYCHSLPGTGNSNLHLDLDSMKTHELPSTVNTDQ
LGLIHSQTPTMGLSSAVQGDSTVNKMMGAVGVGGNSGAAGLTSPMFCSSRPKKLLKTSSF
HLLKQRREPQPPAKKNYAQEYEFEDDEDKADVPADIRLNSRRIPDMLPDLVSSCRKAGGA
PGVSGLSPLMGDMDFCHPSSYSALGHPPQLLPHEGPKKRGRKPTKPKREGPPRPRGRPRI
RPLPEPPYCRGLMGSVAGESRRGRGRGRGRGRRDEGLVEMHRDMNKAQSLPYHHHQQQQQ
QFSQQQHLQQNPHQHHRQQADHHQTPPQQQQPHHLHQQQQHVSCPHHQPHHPQHHHQQQQ
PSEQPQQDPIRPIKIKLPIPTMPPSESLLRTDSLSSTEPVLSDGSVGSAPSLGLSPGPST
TMDINRNELNQTQDKMMKHQQKDGEMMWKKDMDDPLNPEAWAAIQKLSSSADEKAFDFKP
GFMASFLDFLKTGKKQSGLDSENDGSEQELLNPCSSLKGGIRPLSPPPPPLPQTPPQQPP
GAFGEGGQGEGEDLALSGCPSPCKPLDEELKRNLETLPSFSSDEEDSVSKNQDLQKSISS
AISALYDTPHSLAAAMASAMAKAPPTLSPPTPQEPPLSPPLPSMPPLIPSMENGKEEVLT
YTQHHTQDEEEQNLVSPQSNREEAEEREPEQRGEEEGEKEVEEEEEEEGGEETPDNEEIM
SEPQNLQPGALEEQEEQDEEEDERMTDMQMLEVPKVEDSPSGPELAPALPSPSPSISPSP
PTYSSPSPLPPLCLSVPSPQPQQGEEAYPPSEQQQQQQQQQASYQPPPTAGTSPPPSTSP
PAIPSSPLSNLPLGQSIPPPSTTPPPSSSDQDQEPEAGQPSPSSPSSSSPSSSSSPPPSP
PTPEEAPASQRLTSLHLAKKQADAAIAGESEEEDSESGGEGIFRERDEFVVRTEDIGTLK
MALQTGREPPPIWRVQKALLQKFSPEIKDGQRQFCATSNYLGYFGDAKMRYQRLYVKFLE
NVNKKDYVRVCSRKPWHRAGLTLRRQPLPKQLPTIHGQTPPRVERDDRDKERLKERELKE
QREREKEQREREHREKVEKEQKERERREREEREQKEKEKQEREQREKDRKEKEKVEREKE
DREGKESERREKEKEREWEKEREKEKREKEQKERERRQYEREQRERELKERERKNREQRE
KETQEREQRERERQERERRERERQEKERKEKERQEREQKEKEKKEREQSERERQEREQKE
REKQEKERRDKEREKRERERREKQREQKDREQKESEKQREQKEKEGREREKQRDQEKEKR
EREERERRDGTVEFTRLKEEKRAGEKKMEHQSRAKTSKDKTEPPPKKRKKWLKEVPSSSS
SSDSSPPSDDEGPVRGGVNSRAMREMFRSYVEMLVSTALDPDMIQALEDTDDELYLPPMR
KIDSLLSEQKKRLLRRVNMSAQHQEALHIFPKMTADPLESGAVKVHLGGEGYNRKTLNRV
KRSIPKQQDLKLSIETCRIYSLYHSLHHYKYHTFLHCKKETDSIEQAAEDPGQEEVVQQC
MANQGWLESLFNSFMDLLSLSAKA
NT seq
8535 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaattatcccgctgcaggcttcggagatctgggggctgggacgggatggagt
tacgacagatcggccaaagcaagcctcgtgtatgggacctccaggtcatcccacccagac
tccgagctgctccaccggcaggcctacggcacccctcaccccctccagggctatgcaacc
aaccaccacccaggaggctccagacagggcggggcctggggttctgctggacgcacactg
ggcctgtcggggctgtttgatgccagcctccatcatgccagcccctcgggccctgacccc
tccgtcatgaatctgatttcagctctggagtcccggggtccacagcccccaccctctgcc
tcctccctcctctcccagtttcgcactccctcctggcagactgcgatgcatacaccagcc
ccaccagagctttttatttcaggagcgctcccgggctccagctccttcccctcctcctca
gccctttctgcataccagcatcctggctccttctctggacgatctttcaccccctcacta
tccctgcaggatgcgcctccatttagtccaacgtccaatggtttgctgtccccccctgac
cccctgctgcacatcaaaacgccctcccagtccagcttgggctttgatcgcttactatct
tcccagagtgccacctaccggggatcccaggagccttcaggcccttctcagacacaagcc
ccctccacctcttccagttgccatctgccccctccccagttcaacctgttatcctcccag
ctccacaaccagtcctcccagctctataatgcatccatgttctcctccacaccagccctg
ccccctgcagccccccctcaacccccacctcctccggagagggcagtttctcggcaggac
agtgtgatcaagcattaccaacgttcgtctccggcccagtcaacaccactccccttacag
cagtacgtcagctgtggtgggtcatcaggctaccagcagataggcagtcacccccggcat
gctggagtgtcctgcagtcccctaggggagcagagcccctcctccgaccctaagccctca
ccacggatggaatcccagacatatcgacctatcatccaaactccttacacgtcctcgtcc
tccagctcctcggcctcctcctcatcaggcactaaaggagccaagagctccagctccagt
agtggctactcgtcttcgggttcagcatcctcctcccgtaccccgcacacaccaccatca
gcctcttccacttcctcttcatcctcctctagctccaagacgagtgccggctccttgtct
gctccctctcgtcagcagcccccacctcagtcagtgccggcaccacctcctctaccagtg
gtatcatccagccttgttcagcagtcagcacccaaacaatgcctctccacgtatggctct
ccatctgtagccaactctagcacaggcctaccagaccagacccctccaaagcaacacacc
cagtcctactcccccaaccagcctccatctgcacacatgggccagtcttatggaggcttt
agctcacctcatgcccaggacctgagctctggagcagggggcataggagggaaagccttc
actggtataggcacaggaggacgctcattctctgctgagatagtctttggggactcaagc
tttggctcagcttctctcagaagagcaggcagtcctcccttagggtttgggaatgctgga
ggatcaacaggaagtggacctgtatcaggacctgctggatctgcaggatcagggagtggg
gcggctagtgttggtaatggaggcagcagctcttaccacctgcctgagtctagtccctcg
ccctccatcggttctatcagtcgccctgggctgcactctcctgctgctgctcgccctgca
cagtcccccggaggctcaggggcctccaaatatttgtcctccatcctctctcctgctttt
atgccctcgccacaaggtttcccggacacacggcaagcgcagagccagtcctaccactca
tcaccgcccaagccaaaaacagagaccaacatgctgggagttgagcgatcccaagatgag
gaggatgatgatgaagattttctcatccatcacttacttcatgcccagagctcgactccc
catccttcccagcatcactcactccctcagcaactaccacagcccctcccacaggccagg
gacggggaaagcaagggggtggcctacgacatgaacaagatctcagaagagcgctaccac
ctccagagtgtcattcgtaccaacaacaccaccagcagctcaggtcctgacgcagcgagt
ggcttaaacagtcagttggaaataccacagaagaagcagcagcaggccaagtcagagctg
accatatcaaagtccactgctgggggggtgggagtggtcactgactctctgtcccactcc
catactacccactcccaccaacagcagcatgactccatgggctcggtggtccattatgga
agaggggacccatatgcacagcactcacactcccagcactcccatcacacttcacatgtg
tcctcactctctcagcagcaccctcaacactcccagattcccccgcacactcaacacaca
cagcactctcaacattcccagcatggccacccccattcccactcacacagtcatcctcac
atggagctgaagaagacttctgatgcaaatgagaacgcgtacttgtgtaacacaccagat
gtgcagcagactcgacagacccaggtccccctctctctgatggactcaccgccagaccaa
acacacatgctgcagtctgtcctttcccataccacccgctccaagatggacccccagcct
tcacagcagcagcagcagcagcagcatgctctgagccagcaggccatgatggggtcagct
ggaggagccgggccagccggggttgaatcccacccacagaaccagtcctcacagctgcag
ctccagctccagacccagggtatcgatacccactacagcattgcagctcagtcaagagat
caaacccgagccagtcagaactcagtgtctccgctggacatgctagaccagtctctttcc
cggactaacggcagggacagcggaggagctctggacagaactgtggttggggtgtctgtt
acaggaggggaagggggtggtggggacagacatagacagcagcacagacttacaccgcac
caccttccccaacaaacagcctcagatctccatgacttcctctctgaaccagatttgggc
ttgtccacgccctcacaccttcatcacctcaaccagcctcaggcccacgcccaccctcac
acccaccaccaacagcaagcacacacacaccatcagctgtcacacgctcagttagctcac
ccacacccccacaggatggcagcaaatatggggaatccccaacaacagcgacagccccaa
cagagagagcctgagagccagctttcacactcccagttagaccagctcaaacagcaccag
tttgacacagttagcccagtgggtaaagttgtacaaaatcaggctcagcagcagcggttt
gcacctctgacgtccatctgctttccagactctctgttacacgatgaagaccgctctttc
tttcctgagatggaggacatgttttgttcagctgagtacaagtcgagctgtgctggggat
tctggggcaggacaggctgctcaagaaagcctgacccagagccacgggcaggggcaagaa
ggtatggaggtgttaaagacaggaggtgctggagagggctatgatatggtcagtcatcat
agtgaccaaggctacggacagtactgccacagcctgccaggaacaggaaacagcaatctg
cacttagacttggactctatgaagacccatgagcttccctctactgtgaacaccgaccag
cttggcctcatccactcccagacccccactatgggactgagttcagcggttcaaggggac
agcacagttaacaagatgatgggagctgtgggagtgggtggaaattcaggtgctgctggt
ctgacctcacctatgttctgttcgtctcggcccaagaagctgctgaagaccagctcattt
cacctgctcaaacagcggcgtgagccacaaccgccagcaaagaaaaactatgctcaggag
tatgagtttgaggacgatgaggataaagctgatgttccagctgatattcgcctcaacagt
cggcgtattcctgacatgctccctgatctggtgtctagttgtaggaaggctggtggggcg
ccaggagtcagtgggctcagtccgctgatgggtgatatggacttctgccaccccagcagc
tactctgcccttggacaccctccacaactccttccccatgaaggccccaagaaaagaggc
agaaaaccaaccaaaccaaaacgtgaaggcccccctcgcccacgaggcagaccacgcatt
cgtcctcttccagagcctccttactgcagggggctgatgggatcagtggccggagagagt
aggaggggtcgtgggcgtggtcgaggacgaggcaggagggacgaagggcttgtagaaatg
catcgagatatgaacaaagcacaaagcctcccatatcatcatcatcagcagcagcagcag
cagttcagccaacagcagcatctccaacagaatccacaccaacaccacagacagcaggca
gaccaccaccagacaccgccacaacagcaacaaccgcatcacctgcatcagcagcagcag
cacgtttcctgtcctcatcaccaaccgcatcatccacagcatcatcatcaacaacagcag
ccgtccgagcagccgcagcaggatccaatcagacccatcaagatcaaactgcccattccc
accatgcctccatctgaatccttgttgaggacagactcactgtccagcaccgagccggtc
ctgtctgacggatctgtggggtcagcaccgtctctgggcctgagtcctggacccagcacc
accatggatattaacagaaatgagctgaaccagacgcaagacaagatgatgaagcatcag
cagaaagatggagagatgatgtggaagaaagacatggatgatccactgaatcctgaagcc
tgggctgctatccagaaactctccagttcagctgatgagaaggcttttgacttcaaacct
ggcttcatggcctcttttctggacttcctgaagacaggcaaaaaacagtcaggcctcgac
tcagagaatgatggaagtgagcaggaactcctaaacccctgctcctccctgaaggggggg
atcaggcccttatccccgcctcccccccctctaccacaaactcctccgcagcagcctccg
ggagcatttggtgagggagggcagggcgagggggaggacctggctctcagtggctgcccg
agtccctgcaagcctctggatgaggagctgaagaggaacctggagacgctgccctccttc
tcctctgatgaggaggactcggtgagtaaaaaccaggacctgcagaagagcatctcatct
gccatctctgccctctatgacaccccgcactctctggccgctgcaatggcttctgccatg
gccaaggccccacccactctgtctccgcctaccccacaggagccgccactcagccccccc
ctcccaagcatgcctcccctcatccccagcatggagaatggaaaagaggaggtgctcaca
tacactcagcatcacacacaggatgaggaggaacaaaacctggtctccccgcagtcaaac
agagaggaagcagaggagagggagcctgagcagagaggagaggaggagggggagaaggag
gtggaggaggaggaggaggaggagggaggggaggagactccagacaatgaagaaattatg
agcgagccacagaatctgcagccgggagccctggaggagcaggaggagcaggatgaggag
gaagatgagaggatgactgacatgcagatgttggaggttcctaaggttgaagattctcca
tcaggacctgagcttgctcctgcacttccatccccatcaccatccatctctccctcacca
cccacctactcctcaccctcacccctccctcccctgtgcctctctgtaccctcccctcag
ccacagcagggggaggaggcttaccccccctctgagcagcagcagcagcagcagcagcag
caggcctcctaccaaccgcctccaactgcagggacctccccacccccctccacctcccct
ccggccatcccatcctcacccctttccaacctgcccctgggacagtcaatcccccctcca
tccaccactcctcccccatcatcctctgatcaggaccaggaacctgaagcagggcagcct
tccccctcttccccctcctcttcctcaccctcttcatcatcctctcccccaccatcacct
ccaacaccggaagaggccccagcatctcagcgtcttacctccctccacctggcgaagaag
caggctgacgccgccatcgccggggagagtgaagaggaggacagtgagagcggaggcgag
gggatcttccgtgaacgggatgagtttgtggttcgaactgaggacatcgggactcttaag
atggccttgcagacaggccgggagcccccacccatctggagggtgcagaaagccctgctg
cagaaattcagcccagagatcaaagatggtcaacggcagttctgtgcgaccagtaattat
ctgggttactttggtgatgccaagatgcgctaccagcgtctgtacgtgaagttcttggag
aatgtcaacaagaaggattatgtcagggtgtgttcccgaaagccgtggcacagagccggt
ctgaccctcaggaggcagcctctacctaaacaactgcccaccatccacggccagaccccc
ccacgggtggagagagacgatagagacaaggagagactgaaggagagagagctgaaggag
cagagagaaagagaaaaagaacaaagagaaagggagcacagggagaaagtagaaaaggag
caaaaggagagagagaggagagagagagaggagagagagcaaaaagagaaggagaaacaa
gagagggagcagagagagaaggacaggaaagagaaggagaaggtggagagggaaaaggag
gacagagagggaaaggagagtgagcgtagggaaaaggagaaagaaagggaatgggagaag
gagagggagaaagaaaaaagagagaaagagcaaaaagagagggaaagaaggcaatatgag
agagagcagagagagagggagctgaaagagagggagagaaagaacagggagcagagagag
aaggagacacaggaaagggagcagagagaaagagagagacaggagagagagcggagagag
agggagagacaggagaaagaacgaaaagagaaggagagacaggagagggagcagaaggaa
aaagaaaagaaggagagggagcaaagtgagagggagaggcaggagagagagcaaaaagag
agggagaaacaagagaaagagagaagagataaagagagagaaaagagagagagggagagg
agagagaagcagagagagcagaaagatagagaacagaaggagagtgaaaaacagagggag
cagaaagaaaaggagggaagagagagggagaaacaaagggatcaggaaaaagagaaaagg
gagagagaggagcgagagaggagagatggcacagtagagttcacaagactgaaggaggag
aagagagcaggagagaagaagatggagcatcagtccagagccaagacttcaaaggacaag
actgagcctcctcccaagaagaggaagaagtggctgaaggaggtgccgtcctcctcctcc
tcctcagactcctctccacccagtgatgatgaagggcctgtgaggggtggagttaacagc
cgagccatgagggagatgttcaggagctatgtggagatgctggtcagcacagcactcgac
cctgatatgatccaggctctggaggacactgatgatgagttgtacctccctcccatgagg
aagattgatagcctgctcagtgaacagaagaagaggctgctgaggagagtcaacatgagt
gctcagcaccaggaggctttacatatattccccaaaatgacagcagacccactggaatct
ggagcagtcaaagttcatcttggtggggagggctacaaccgcaaaactctcaaccgggtc
aagaggagtattcctaaacaacaggatctgaagctttcaattgaaacttgccggatctac
agtctgtatcattcacttcaccactacaagtatcacactttcctgcactgtaagaaggag
acggacagtattgagcaggcagcggaggaccccggccaggaggaggtggtgcagcagtgc
atggctaaccagggctggctggagagtctctttaactccttcatggatctgctcagcctt
agtgccaaggcctga
DBGET
integrated database retrieval system
