Lates calcarifer (barramundi perch): 108898743
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Entry
108898743 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich glioma-inactivated protein 1b
KO
K25428
leucine-rich repeat LGI family member 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
108898743
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Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRRCT
Rax2
Motif
Other DBs
NCBI-GeneID:
108898743
NCBI-ProteinID:
XP_018554281
UniProt:
A0AAJ7QEX0
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Position
LG23:complement(9761628..9774775)
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AA seq
550 aa
AA seq
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MGYPGRAVRGWRGWKGWTLLVWVAAVSPLLADGRRVRQPRCPSGCICTKDNALCENVRSV
PHTFPPDVVSLSFVKSGFHEITGGSFVHTPALQLLLFTANSFDLIDEDAFLGLPHLEYLF
IENNKIASISPFAFRGLKALIHLSLAYNNLETLPKDVFKGMDALTKVDLRGNNLICDCKL
KWLVEWMHHTNATLDEIYCSGPPIHQGKKINDLLPHSFDCITAEFASYQSLKFESISVEA
FTFGKDQYVVFPQPFAGTCSFLEWDHVEMTFRTYDTIESTSTVVCKPMVINNHLFIIVAQ
LFGGSHIYKRDTSANKFIKIQDIDILKIRKPNDVETFVIDGESFFVIADSSKAGSTTVYK
WNGNGFYSHQSLHPWYRDTDVEYLEISNKPHLILSSSSQRPVVYQWNRNQKQFDRRTDIP
DMEDVFSVKHFRVQGELFICLTRFIGDSKVMRWDGALFKEVQTFPSRGSMVFQPVSVGKW
QYAILGSDYSLTQVYLWDTKRGQLVPSQELNIQAPRAFSLVSIDGRVFLLASSFKGKTQI
YEHLMIDLSN
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgggatacccgggcagagcagtgagaggatggagagggtggaaaggatggacgctcttg
gtttgggtcgccgctgtcagcccgcttttggcagacggacggagagtgaggcagcccaga
tgtcccagtggatgtatctgcaccaaagacaatgccctgtgtgagaatgttcgatccgtg
cctcacactttccccccagacgtcgtgtcattatcttttgttaagtctggatttcatgaa
atcaccgggggaagctttgttcacacgcctgccctgcaactgctattgttcacagcaaac
tcgtttgacctcattgatgaagacgcattcctaggcttaccacatcttgaatatctattt
attgaaaataacaaaattgcatcaatatccccatttgcgttccggggcctgaaagcactg
atacatctgagtctggcttacaacaatcttgagacgctgcccaaggatgtcttcaagggc
atggatgctttgaccaaagtggatctgcgaggcaacaacctgatatgcgactgcaagctc
aagtggctggtggagtggatgcaccacaccaatgccaccctggatgagatctactgcagc
ggcccgcccattcaccagggcaagaagatcaatgacctgctaccacactcttttgactgc
atcacagcagagtttgcctcctatcagtcactgaagttcgagtccatttcagtggaggcc
ttcacctttggtaaagatcagtatgttgtgtttccccaaccatttgctgggacctgcagc
ttcctagaatgggatcatgttgagatgaccttcagaacctatgacaccattgaaagcacc
tccaccgtggtctgcaagcccatggttatcaacaaccacctcttcatcattgtggcccag
ttgttcgggggttcgcacatttacaaacgcgacacctccgccaacaagttcatcaagatc
caggacatcgacatcctgaaaatccgcaaacccaatgacgtcgagacgttcgtgatcgac
ggggaatctttcttcgtcatcgccgacagttctaaggccggctccacaacggtgtacaaa
tggaacggcaatggcttctactcccaccagtctctccacccgtggtaccgggacacagat
gtagaatatttggagatctccaacaagccccacctgatcttgtccagcagctcccagagg
cctgttgtgtaccagtggaacaggaaccagaaacagtttgaccgccggactgacatacca
gacatggaggacgtcttctctgtcaaacactttcgggtccaaggtgagctgtttatatgc
ttaacaagattcatcggggactccaaggtgatgcgctgggacggtgccctgttcaaggag
gtccagacatttccctcccgcggctccatggtgttccaacctgtctcagtcggcaagtgg
cagtacgccatcttgggcagcgattactcactgacgcaggtctacttgtgggacaccaag
aggggccagcttgtcccatcccaggagctgaatatccaggcacctcgagcattctctctg
gtttccatcgacggccgggtattcctgctcgcgtccagcttcaagggaaaaactcagata
tacgagcacctcatgattgatttgagtaattaa
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