Lates calcarifer (barramundi perch): 108899027
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Entry
108899027 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: dedicator of cytokinesis protein 1
KO
K13708
dedicator of cytokinesis protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04148
Efferocytosis
lcf04510
Focal adhesion
lcf04810
Regulation of actin cytoskeleton
lcf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108899027
09144 Cellular community - eukaryotes
04510 Focal adhesion
108899027
09142 Cell motility
04810 Regulation of actin cytoskeleton
108899027
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108899027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108899027
Membrane trafficking [BR:
lcf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108899027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_DOCK
DOCK_N
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_A
DHR-2_Lobe_B
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
108899027
NCBI-ProteinID:
XP_050922084
UniProt:
A0AAJ8AWN9
LinkDB
All DBs
Position
LG23:13012083..13179876
Genome browser
AA seq
1890 aa
AA seq
DB search
MSRWVPTKKEKYGVAIYNYDARGEEELSLQIGDTVHILETYEDWYRGHRLRRKSKKGIFP
ACYIHLKEATVEGSGQKETVIPTELPLVQEVTTTLREWATIWRDLYVGDKREMFNSVRDM
IYDLIEWRSQILSGTLPQDELTELKQRVTSKIDYGNKYLDLDLVVRDKDGNILDPELTST
ISLFRAHEAASKQIEDRIQEEKSQKQNIDLTRQAKFASTPAFALFVTLKNVVCKIGEDAE
VLMSLYDPVESKFISENYLVKWSSSGLVKDIDQLHNLRAVFTDLGSEDLKREKISFVCQI
VRVGRMELRDNNTKKLTSGLRRPFGVAVMDVTDIITGKMDDEDKQHFIPFQPLALDDAIR
HKQLNISRFSPRVAGENDFLQTVINKVITAKEVNHKAQGLWVTLKLLPGDIHQIRKDFPH
LVDRSTAVARKMGFPEIIMPGDVRNDIYVTLVQGDFDKGSKTTPKNVEVTMSVYDEDGKK
LENVIFPGAGDEGINEYKSVIYYQVKQPRWFETIKVAIPIEDVNRSHLRFTFRHRSSQDS
KDKSEKIFALSFVKLMRYDGTTLRDGEHDLIVYKAEAKKMEDSSLYLNLPATKLELEEKG
YSTTGKSTQNLGNCTISKDSFQISTLVCSTKLTQNVDLLGLLKWRSNTSLLQQNLRQLMK
VEGGEVVKFLQDTLDALFNIMMENSDSDTFDTLVFDALVFIIGLIADRKFQHFNPVLETY
IRKHFSATLAYMKLTKVLKNYVDNAEKLTEQLLKAMKALEYIFKFIVRSRVLFNQLYENK
GEADFVESLRNLFTSFNDMMNSNSENTGMVKGAALKYIPTIVNDVKLVFDPKELSKLFTE
FILKVPLGRLVKQKLDCLIDIVHSDLFTHHDCREILLPLMTDQLKFHLEKREELKACCQL
LSDILEVLYRKDVGPTQWHVQIIMEKLLRTVNRTVISMGRDSPHIGSFVASMTATLRQMD
DYHYAHLISTFGKIRSDVVDFLMETFIMFKDLIGKNVYPSDWVIMNMMQNKVFLRAINQY
AAVLNKKFLDQTNFELQLWNNYFHLAVAFLTQESLQLENFSSDKRVKIFHKYQDMRRQIG
FEIRDMWYNLGPHKIKFIPEMVGPILEMTLVPEIELRKATIPIFFDMMQCEFHFTCSFQR
FENEIITKLDHEVEGGRGDEQYKVLFQKILLEHCRKHKYLAKTGENFVTLVVRLLERLLD
YRTIMHDENKENRMSCTVNVLNFYKEIDREEMYIRYLYKLCDLHKECDNYTEAAYTLLLH
AKLLKWSDEQCAAHLTQRDGYQATTQGQLKDQLYQQIINYFDKGKMWEEAIILGKELAEQ
YENEMFDFEQLSASLRKQAQFYENIVKVIRPKPDYFAVGYYGMGFPSFLRNKMFIYRGKE
YERREDFEARLLTQFPNAEKMKTTTPPSEDTKCSSGQYIQCFTVKPILDLPAKFQNKPVS
EQIVSFYTVNEVHKFQYSRPVRKGEKDPDNEFANMWIERTTYTTAYKLPGILRWFEVKSV
STEEISPLENAIETMQLTNEKISSMVQRHLADPNLPINPLSMLLNGIVDPAVMGGFTNYE
KAFFNDKYMQEHPEDLEKIEKLKDLIAWQIPHLAEGVRIHGEKVTEALRPFHDRLEACFK
QLREKVEKQYGAKTLPAADERRGPRPHSMVRSFTMPSSQRPLSVASVTSISSDNSPSRPG
SDGFALEPLLPKKLHTKSQDKLDRDEPERERKEKKKEKRNSKHQEIFDKEMKTTEIQLQP
TEAVILSETISPLRPQRPRSQVLNQMGGDRRLSVSPGPPSSSSNSSSSPGPPPITPRSKL
SFSTLTVSSLELNGMGCSDKGETPPPLPVKGSTADYGNLLDNQDLTSPSTPPPPPPHQRH
IPPPLPSKTPPPPPPKTTRKQASIDSGIVQ
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgctgggtgcccactaaaaaggaaaagtatggtgttgcaatctataactacgat
gcccggggagaggaggagctgtcgctgcagattggagacacagtgcacatacttgagaca
tatgaagactggtacagagggcataggctgaggagaaaatccaaaaagggcatatttcct
gcttgctatatacacctgaaagaggccacggtcgagggcagtgggcaaaaagagacagtc
attcccacagagctgcctttggttcaggaggttaccaccacactgcgggagtgggctaca
atatggagggacttatatgtgggggacaagcgtgagatgttcaactccgtccgtgacatg
atctacgacctcatcgaatggcgttcccagatcctgtccggcaccctcccacaggacgag
ctcacggagctcaaacagagagtcacctccaagatagactacggcaacaagtacctggat
ctcgatctggtggtcagagacaaagatggaaacatactggatcccgagctcaccagcacc
atcagtctgtttagagcacatgaggcggcctccaaacaaattgaggaccggatccaagag
gagaagtctcagaagcagaatatcgatctgaccaggcaagcaaagtttgcttccactcca
gcatttgccctctttgtgactctgaagaatgtggtatgtaagattggtgaagatgcagag
gttctgatgtcactctatgacccggtggagtccaaatttatcagtgaaaactacctggtg
aaatggtcaagttcaggtctggtgaaagacatagaccagcttcataatctgcgggcggtc
ttcacagacttaggcagtgaagatcttaaaagagagaagatcagctttgtgtgtcagatt
gtcagagtggggcgcatggagctgcgagacaacaacaccaagaagctgacatcaggacta
agaaggccctttggagtggcagtaatggatgtcaccgacatcataacaggcaaaatggac
gatgaggacaaacagcactttatcccatttcagccgctagcgttggatgacgccattcgc
cacaagcagctgaacatctcccgtttttcacccagggtggcgggggagaacgacttcctc
cagaccgtcatcaacaaagttatcaccgccaaagaggtcaatcacaaggcacaaggcctg
tgggtgactctgaagctgcttcctggagacatccatcagattcggaaggacttccctcac
ctggtggatcgatcgacggccgtggctcgcaagatgggctttcctgagatcatcatgcca
ggtgacgttcgaaacgacatctacgtgactttggttcagggagactttgacaaggggagc
aagaccacgcccaaaaacgtcgaggtgaccatgtctgtttacgacgaggacggcaagaag
ctggagaatgtgatcttccctggagctggagatgaggggatcaatgagtacaagtctgtc
atctattaccaagtcaagcagccacgctggtttgaaacaataaaggttgctattcctatt
gaagatgtgaaccgtagccacttacggttcacgtttcgccaccgctcatcgcaggactca
aaagacaaatcagagaagatattcgccttgtcttttgtgaagctgatgaggtacgatggg
acgactctaagggacggcgagcacgatcttattgtgtacaaggcagaagcaaagaagatg
gaagactcgtctctgtacctgaacttacctgccaccaagctggagctagaggagaagggc
tactccactaccggtaaaagcacccagaacctgggcaactgcactatcagcaaggattcc
ttccagatctccaccctggtctgctccaccaagcttacacagaatgtggacctacttggc
cttctgaagtggcggtccaacaccagcctcctgcagcagaacctccgtcagctgatgaag
gtggaaggtggcgaggtcgtcaagtttctgcaagacactctggatgctctcttcaacatc
atgatggagaactctgacagtgacacttttgatactttggtgtttgatgccttggtgttc
ataattgggcttatagccgacagaaagttccagcactttaatcctgtcctggagacctac
attcgaaagcatttcagtgccacactggcatacatgaagctgaccaaagtcctgaagaac
tatgtggacaacgctgagaagctgacagaacagctgctgaaggccatgaaggctctggag
tacatcttcaagttcatcgtgcgctccagagtcctctttaaccagctctatgagaacaaa
ggagaggccgacttcgtggagtccttgaggaaccttttcacatcctttaatgacatgatg
aacagtaattcagagaacactggcatggtaaagggtgctgcactgaagtacattcccacc
attgtcaatgatgtcaagctggtctttgatcccaaagaactgagcaagcttttcaccgag
ttcatcctaaaggttcctctgggtcgcctggtgaaacagaagctggattgtctgattgac
atcgtccacagcgatctcttcactcatcacgattgccgcgagatcctcctgccgctgatg
acggaccagctgaagttccacctggagaagcgggaggagctgaaggcttgctgccagctg
ctgagtgacatcctggaggtgctctacaggaaggatgtgggtccaacccagtggcatgtg
cagatcatcatggagaagctgctgaggacagtaaacaggacagttatttccatgggccgc
gattcccctcacattgggagctttgtggccagcatgactgccacactgaggcagatggac
gactatcattatgctcatctgatcagcacctttggcaagataaggagtgatgtggtggat
ttcctaatggaaacatttatcatgtttaaagatctcattgggaaaaatgtctacccctca
gactgggtcataatgaacatgatgcaaaataaagtgttcctacgggccattaatcagtat
gcagcagtgctgaacaagaaatttctggatcaaaccaactttgagctacagctgtggaac
aactactttcacctggcagtagccttcctcactcaggagtcattgcagctggagaacttc
tcaagcgacaaaagagtcaagatcttccacaagtaccaggacatgagaaggcaaattggc
tttgaaatcagggatatgtggtacaatctcgggccccacaagataaaatttattccagag
atggtgggcccaatcctggagatgacactagttcctgagattgagctgcgaaaggccacc
atccccatattcttcgacatgatgcagtgcgagttccacttcacatgcagcttccagcgg
tttgagaacgagatcatcaccaagctggatcacgaggtggaggggggccgcggagacgag
cagtacaaagttctctttcagaaaattttacttgagcactgcaggaagcacaagtacttg
gccaagaccggtgagaacttcgtcactctggtggttcgtctgctcgagaggttgctggac
tacaggaccatcatgcatgatgagaacaaggagaaccgcatgagctgcactgtcaacgtt
ctcaacttttacaaggagatcgacagagaggaaatgtacatcaggtacctgtacaagctg
tgtgacctccacaaagagtgcgacaactacacagaggctgcctacactctgctgctgcac
gccaaactgctcaagtggtcagacgagcaatgcgcagcccaccttacccagagagacggc
taccaggccaccactcaaggacagctcaaggatcagctctaccagcagattatcaattac
ttcgacaagggcaagatgtgggaggaggcaatcattttgggaaaggaactggctgaacag
tacgagaatgaaatgtttgactttgagcagctcagtgcatccttgaggaagcaggcccag
ttctacgagaacatagtgaaggtcatccggcccaaaccagactactttgctgtcggttat
tatggcatggggttcccctccttcctacgaaacaaaatgttcatctaccgtgggaaggag
tatgagcgcagggaggattttgaagcacggctcctcacacagtttcccaacgcagagaag
atgaagacgaccacacctcccagcgaggacactaagtgttcctctggacagtacatccag
tgtttcacggtgaaacccatcctagacctgcctgccaagttccagaacaagcccgtctca
gaacaaatagtgagcttctacacagtaaatgaagtccataaattccagtattccaggcca
gtgaggaagggagagaaggaccccgacaatgagtttgcgaacatgtggattgagaggacc
acgtatacgacagcatacaaacttcctggcatcctgcgctggtttgaagtcaagtcagtc
tccacagaggagatcagtccactggaaaatgccatagaaacgatgcagctgaccaatgag
aagatcagcagcatggtgcagaggcatctcgcagaccccaaccttcccatcaacccgctc
tcaatgctcctgaatgggattgtggacccagctgtcatgggcggttttaccaactatgag
aaggccttcttcaatgacaagtacatgcaggaacacccagaggaccttgagaagatagag
aaactgaaggaccttatcgcctggcagatcccgcacctcgccgaaggtgttcgcatccat
ggggagaaggtcactgaggcgctgaggcctttccacgaccgcttggaggcctgtttcaag
cagctgcgagagaaggtggagaaacagtacggggcaaagactctgccggcagcagacgag
cggcgggggcctcgtccacactccatggtgcgctccttcaccatgccctcctcccagcgg
ccgctgtcagtggcctcagtcacctccatttcctctgacaactccccctccaggcctggt
tcagatggttttgccctggagcctctcctgccaaagaagctgcataccaagtctcaggac
aagctggaccgggacgaacctgagagggagcgcaaagagaaaaagaaggagaagaggaac
agtaagcaccaggagatcttcgataaggagatgaagaccaccgagatccaactgcaaccc
actgaagcggtcatactttcagagacgatcagccccctgcgtcctcagagaccaaggagt
caagttctcaaccagatgggtggagatcgccgcctctctgtgtcccctggacccccttct
tcctcctccaactcctcctcctcaccgggacccccacccatcactcccaggagtaaactc
tcctttagcacactcactgtttccagtctggagctgaatgggatgggctgctctgacaag
ggcgaaacccctcctccgctgcctgtgaaaggcagcacggctgattatggcaacctgtta
gataatcaagacttgacgagtccctcgacgcctccaccacccccaccacatcaaaggcac
attcctcctcctctgcccagcaagacccctcctccccctcctcccaagaccaccaggaaa
caggcctccatcgattcaggaattgtacagtga
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integrated database retrieval system
