Lates calcarifer (barramundi perch): 108899186
Help
Entry
108899186 CDS
T04895
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04020
Calcium signaling pathway
lcf04510
Focal adhesion
lcf04540
Gap junction
lcf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108899186
04020 Calcium signaling pathway
108899186
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108899186
04540 Gap junction
108899186
09142 Cell motility
04810 Regulation of actin cytoskeleton
108899186
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108899186
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lcf04090
]
108899186
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
108899186
Protein kinases [BR:
lcf01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
108899186
CD molecules [BR:
lcf04090
]
Proteins
108899186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Adeno_E3_CR1
VEGFR-1-like_Ig-like
Ig_VEGFR-1-like_5th
Haspin_kinase
RIFIN
Motif
Other DBs
NCBI-GeneID:
108899186
NCBI-ProteinID:
XP_018554995
UniProt:
A0A4W6C9G9
LinkDB
All DBs
Position
LG8:complement(10947841..10977908)
Genome browser
AA seq
1105 aa
AA seq
DB search
MRRVTVSTLHLTVTVTALLYLCTELRCLEITPKDKEIILPRGSSLTLTCSGAGETTWEFK
REDVPFFQLEQGQNSGQSYQIVQNGTGSSILTLWNMSWKQTGVYQCVDQQTGETKEVVVF
VPDPDVWFIESSHGMVTKTSEESTIPCVVTNPDINVTLYEKDTDMPIKGQYIPSEGYKAQ
LEDRTYMCRGELNGTVKESQAFYVFSIVVPEALDAYINASKTVLKQGEPLTVNCTVHGVE
LVFFSWDIPNREAIDVEPLTDVISSMNMRSCLMFPRATVAHSGNYICHVHEGVQDQTASA
SVNITVLERGFVDVKPAQQQNISAKLQENVELRVEIEAYPPPQVRWSKDGATIKGDKTIT
SRQEHEIRYVTILTLVRVRTEQKGRYTVTVTNGDDTKEVTFDLEVQVPSQIKDLADHHLP
GKRHLVTCIAEGVPTPTIQWYSCDSMLKCSNQTVVWQPLVPEPEELSIQTNVSYNETRKT
SQVRSQVIFYKPQQVTVRCETSNQAGLVDRRDVKLVSSTLFSQVAVLAAVLALVVIVILS
FIILIAVWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMPRDNLVLGRTLGS
GAFGRVVEATAYGLTHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLL
GACTKHGPLYLVTEYCRYGDLVDYLHRNKHTFLQYYAEKNQDDGCLISGGSTPLSQRKGY
VSFGSESDGGYMDMSKDEPSVYVPMQEQIDTIKYADIQPSPYESPYQQDIYQEQGGGRLD
LVISDSPILTYDDLLGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLAR
DIMHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPM
NELFYSALKRGYRMAKPAHASDEVYDIMKKCWDEKFEKRPEFSFLVHSVGNMLTDSYKKR
YNQVNDNFMKSDHPAVARTKPRLSSPFPIANPSFGSPSPINLPFPPDPYNQSLSPGDFRQ
EAGTQEVITSYNEYIIPIPDPKPEEVFTDVPSESPASSVALEEETDSMSQDTADTLPEED
RLEETSERDALLGSSGTPEVEDSFL
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgaggagggtaaccgtatccacgctccatctgacagtcacagttacagctctcctgtat
ctctgcactgagctgcgttgcctggaaatcacacccaaagacaaagagatcatccttccc
aggggctcctctctcacccttacctgctccggcgcgggggagacgacctgggagtttaag
agggaagatgtaccttttttccaactggaacaaggtcagaacagtggccagagctaccaa
attgtgcaaaatggcactgggtccagcattctgaccttgtggaacatgagctggaagcag
acgggggtgtatcagtgtgttgatcaacagactggagaaactaaggaggtggttgtcttt
gtaccagaccctgatgtgtggttcatagagagctcccatggcatggtaaccaagaccagc
gaggaaagcaccatcccctgtgtggtcaccaacccagacatcaatgtcaccctgtatgag
aaggacactgacatgcccatcaagggacagtacattcccagtgaggggtacaaggcacag
ctggaggacaggacctacatgtgtcgtggggagctgaacggaacagtgaaagagtcccag
gctttctatgtcttcagcatcgttgtcccagaggcacttgacgcctacatcaacgcgtca
aagacggtcctgaaacaaggcgaaccgctgacagtgaactgcacggtgcacggagtggag
ctggtgtttttttcctgggatatccccaacagagaggctattgatgtcgagccgctgacg
gatgtcatctcctctatgaacatgcgctcctgcctgatgttccctcgtgccacagtggcc
cacagcggaaactacatctgccatgtccacgagggtgtccaagaccagaccgcctctgcc
agcgtcaacatcactgtgctcgagagaggctttgtggacgtgaagcctgctcagcaacaa
aacatttctgccaagttgcaagagaacgtggagctgagggttgagattgaagcctaccct
ccccctcaggtccgctggagcaaagacggcgccaccatcaagggagacaaaaccatcaca
agcagacaagagcatgagatcaggtatgtcactattctcactttagtgagggtgaggaca
gagcagaagggccgctataccgtcactgtcactaacggagatgatacaaaggaagtgacc
tttgaccttgaggtccaagttccctctcagattaaagacctggctgaccaccacctcccg
gggaagagacacttggtgacctgtatagctgagggggtcccaaccccgaccatacagtgg
tacagctgtgacagcatgctcaagtgcagcaaccagacggtggtgtggcagccgctggta
ccagagccggaggagctgagcatccagaccaacgtgagctacaatgagactcgtaaaacc
agtcaggtgcggagccaggtgatcttctacaagccccagcaggtcacagtccgctgtgag
accagcaaccaagcagggcttgttgacagaagagacgtcaaactggtgtccagcacattg
ttctcccaggtggcagtgttggctgctgttctcgccttagtggtgattgttatcttgtct
ttcatcatcctcatcgctgtatggaggaagaaacctcgctatgagatcagatggaaggtg
atagagtctgtgagccaggacggtcatgagtacatttatgtggaccccatccacctgccc
tatgacctggcttgggaaatgccacgagacaacctggtgctgggtcgcactcttggatca
ggagcctttggcagggtggtcgaggcgactgcgtatggtctcactcattcccagtccagc
acaaaagtggcagtgaaaatgctgaagtccacagccaggaggagtgagactcaggccctg
atgtcagagctgaagatcatgagccacctgggtcctcacctcaacattgtgaacttgctt
ggagcttgcactaaacatggccctctgtacctggtgactgagtactgtcgctatggtgac
ctggtggactacctgcacaggaacaagcacaccttcctgcagtattatgccgaaaagaac
caagacgacggctgcctcatctcagggggaagcactccgctgagccagaggaaaggctat
gtgtcttttggaagtgagagtgatggaggttacatggacatgagtaaagacgagccctca
gtctacgtgcccatgcaagagcagatagacaccatcaagtacgcagacatccaaccttct
ccatacgagtccccctaccagcaagacatctatcaggaacaaggtggcggcaggttagac
ctggtcatcagtgactctcccattctcacctacgatgatcttttgggcttcagctaccaa
gtggcaaaggggatggagttcctcgcctccaagaattgcgtccatcgagacctcgctgcc
aggaatgtcttgatctgtgagggcaaactggtgaagatctgtgacttcggcctggccaga
gacatcatgcatgactccaactacatctctaaaggcagcaccttcctgcccctgaagtgg
atggcaccagaaagtattttccataatttgtacaccaccctcagtgatgtgtggtcatac
ggcattcttctttgggagattttcacactgggaggaaccccctaccctgatttgcccatg
aatgagttgttctacagcgctttgaagagaggctaccgaatggccaaacctgcccatgcc
tctgatgaagtttatgatattatgaagaagtgctgggatgagaagtttgagaagaggcct
gagttctcctttctggtgcacagtgtggggaatatgctgactgacagctataaaaagaga
tacaaccaagtcaacgacaacttcatgaagagtgaccacccggcagtcgcccgcaccaaa
cccagactctcctcaccctttccgattgccaacccatcatttggctccccctcccccatc
aacctccccttccccccggacccctacaaccagagcctgagccctggagacttcagacaa
gaggcaggcacgcaggaagttataacttcatacaacgagtacatcattcccatcccagac
cccaagccggaggaagttttcactgacgtgccgtcggaaagccctgcaagctctgtggct
ctggaggaggagaccgactccatgtctcaggacacggcagacactcttccagaggaggac
aggctggaggagaccagcgagagagacgctctgctgggctcctctgggacgcccgaggta
gaagacagcttcctgtag
DBGET
integrated database retrieval system
