Lates calcarifer (barramundi perch): 108899375
Help
Entry
108899375 CDS
T04895
Name
(RefSeq) S-acyl fatty acid synthase thioesterase, medium chain
KO
K01071
medium-chain acyl-[acyl-carrier-protein] hydrolase [EC:
3.1.2.21
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00061
Fatty acid biosynthesis
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108899375
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lcf01004
]
108899375
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.2 Thioester hydrolases
3.1.2.21 dodecanoyl-[acyl-carrier-protein] hydrolase
108899375
Lipid biosynthesis proteins [BR:
lcf01004
]
Fatty acid synthase
Component type
108899375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thioesterase
Abhydrolase_6
Abhydrolase_1
Hydrolase_4
Lipase_3
Motif
Other DBs
NCBI-GeneID:
108899375
NCBI-ProteinID:
XP_018555297
UniProt:
A0A4W6EHR3
LinkDB
All DBs
Position
LG3:complement(18019963..18022487)
Genome browser
AA seq
262 aa
AA seq
DB search
MELPASNRMEKVINCFKKRPDAVARLICFPWAGGGSIHYARWGNVLSSSVEVFAVKLPGR
ESRAKEPFFQSMQQIVDEVIGVLLPMLKEKPFALFGHSFGAFTSFAVADALKKLHNLEPV
HIFLSGASAPYSETRITAPKRSELSDDDFLKWLISIGGTPPELLANPEVLKLFLPALKAD
LHVVENYRCNKPDHPFLSCPVTCFDGKDDIPHDLQAWKDITSGDFTVRMLDGSHFYLKES
GNEKIILDYVTKHLETSEMDYL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggagctgccagcatcaaacaggatggagaaggtgatcaactgtttcaagaaaagacca
gatgctgtggccaggctgatctgcttcccctgggcaggaggagggtccatacactatgca
cgctggggaaacgtcctcagcagctctgtggaagtgtttgcagtcaaacttccaggcaga
gagagtcgagccaaagagccgttctttcagagcatgcagcagattgtggacgaggttatt
ggcgtgttgctgccgatgctgaaagagaagccgtttgctctctttggccacagttttggt
gctttcacaagttttgcagtggcagatgctctgaagaaactccacaacctcgaaccagtt
cacatcttcctgtctggtgcctctgcaccttattcagagactcgcatcacagccccgaag
agaagcgagttatcagacgacgatttcctcaagtggttgatttcgattggaggaactcct
cccgagctcctggccaaccccgaggtcctgaagctcttccttcccgccctgaaggccgac
ctgcacgtcgtagagaactacaggtgtaacaagccagatcatccattcctgtcctgcccg
gtcacatgttttgatggaaaagacgacatccctcatgacttacaagcttggaaagacatc
acatcaggagatttcaccgtcaggatgctcgatggatctcacttttacctgaaggaatct
ggaaatgaaaaaataatattagactatgtcacaaagcatctggaaacatcagagatggac
tatttataa
DBGET
integrated database retrieval system
