Lates calcarifer (barramundi perch): 108899589
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Entry
108899589 CDS
T04895
Name
(RefSeq) uncharacterized protein LOC108899589 isoform X1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108899589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108899589
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lcf04054
]
108899589
Membrane trafficking [BR:
lcf04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
108899589
Pattern recognition receptors [BR:
lcf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
108899589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PYRIN
FIIND
UPA-FIIND
DED
Motif
Other DBs
NCBI-GeneID:
108899589
NCBI-ProteinID:
XP_018555614
UniProt:
A0AAJ7VIL5
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All DBs
Position
LG15:6018955..6031739
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AA seq
1073 aa
AA seq
DB search
MMLRTLLLETLNKLSSEELDEFKSLIKLEKSFPLISKSQLRVAHLKDVVELMVKTFSQEC
VEVTTNVLEKLKRTDLLQRLSDVSSGTKDKHFLVEPKTALIQKEETLASVIELLLKTLAD
LSDREMEDFKQVLLSQTDCYKRYSEITWRLLMMTDLQDTVLSMVQTYGQRSVEKTKEILE
MMKRTGLADSSSVPKKKLSMDEHLSALIHKVATMTALKQLLLETLNNLSHNEFKKFRWFL
QLTFFQKCLPQIPWRRLKRADRADLLVDVMVERCGQQSVELTMEVFMDMNRPDLVQKLSE
SSSGLASGSSAEVFGMNTTEGEKPSVDERWPALIQKEETLASVIELLVETLSDLSNRELK
DFKQVLLSQIDCYKRYSDVTWRMLRMTDLQDTVFLIVQTYSQQSVEKTKEVLKRMRRNDL
VQRLSDSSSGAKQKLSVDEHRSALIQKVATMAAVKQLLIETLNEEELEKFKKVLQLVVVE
WGLPDISRMLSHTADRVEIADLMVETYGHQSVDVTKKVFVKMNRTDLVQRLSSSTPKEKH
SGDKHRPTQLERILLETLNGLSHKELKKYKWFLQFSYFKRGLPQIPWSQLEKADRAELVD
LMMEMCDQQSVEVTREVFMDMNRTDLVQRLSETSSGLGDDKDKQDDYDEDNKKESLYCPR
HSGSLELEGCGSCMVIPPIHSPALKPEVNSTDADEAPTYSLQSEAGNFECSVSALRWVCK
EKVSLKYQFWSWEGHMERMASRRYMPAGPLMDISVISGKLDEVYLPHWICVEDNPSILDR
FAVLHIDNCGDVVEKVSEVTPSHVKLSEPVFSPRAVLIKFGIPCKIKCQVLIYYQPNASF
LKLHVYLIPCDPALKQIVDKKESSYRYKAIIKPHPDKYLKMHQGFILTTDMDTAKILPKK
LTLRYDSQDPNFYEVFIKNPDRNFYLTLLSSCKNKDVLVWTCEIREDDFPSSIPVEATGS
SGEATGVNTLAQDSSTVDEDLSEQFNKATITPVREKLLKMLEHLKEEEFKGFKWYLEDSA
VLPGPTCIPKSKLEKADKLDLVELMMQTYNQQCVEVTKRVFKKIKRNDLVQML
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgaggacgctgcttcttgaaacactgaataaactgagttctgaggagcttgat
gaattcaagtcactcattaaactggagaaaagtttcccactcatctcaaagagccaactg
agagtggcacacctgaaggatgtagtggagctgatggtcaaaacgttcagccaagagtgt
gtggaggtgaccacaaatgttttagagaagttgaagaggactgatctgctgcagagattg
tcagatgtcagctcaggaaccaaagacaaacactttctggttgaaccgaagactgcactg
atccagaaagaagaaacactggcgtctgttatagagctgcttttgaaaacactggctgat
ttgagcgacagagagatggaggactttaagcaggttctcctgagtcaaactgactgttac
aaacgctactcagaaatcacatggaggctgctcatgatgacagacctgcaggacacagtg
ttatcaatggtgcagacttatggccaacggtctgtggagaagaccaaggagattttagag
atgatgaagaggactggtctggctgacagcagctcagtacctaaaaaaaaactctccatg
gatgaacacctgtctgcactgatccacaaagtggcaacaatgacggctcttaaacagctg
cttttggaaacactgaataatttgagtcacaacgagttcaagaaattcagatggttcctg
cagctcacattcttccagaagtgtcttccacaaatcccatggagacgactgaagagggca
gacagggcagacctgctggtggatgtgatggtggagaggtgcgggcagcagtctgtggag
ttgaccatggaggttttcatggacatgaacaggcctgatctggtgcagaagctgtcagag
tccagctcaggactcgcttcaggatcatcagctgaagtatttggcatgaatactacagag
ggagaaaaaccttctgtggatgaacgttggcctgcactcatccagaaagaagaaacactg
gcgtctgttatagagctgcttgtggaaacactgtctgatcttagcaacagggagctcaag
gactttaagcaggttctcctcagtcaaattgactgttacaaacgctactcagatgtcaca
tggaggatgctcaggatgacagacctgcaggacacagtgtttttaatagttcagacttac
agtcagcagtctgtggagaagaccaaggaggttttaaagaggatgaggaggaatgatctg
gtgcagaggttgtctgacagcagctcaggagccaaacagaaactctctgtagatgaacac
cgctctgctctgatccagaaagtggcaacaatggcagctgttaaacagctgcttatagaa
accctgaatgaggaggagctggagaaattcaagaaagtcctacagttggttgttgttgag
tggggcctcccagacatctcacggatgttgagtcacactgctgacagggtagaaatagca
gatttgatggtggagacctacggccatcagtctgtggacgtgaccaagaaggttttcgtg
aagatgaacaggactgatctggtccagaggttgtccagctcaacacccaaagagaaacac
tctggtgataaacatagacctacacagttggaaagaattcttttggaaacactgaatggt
ttgagtcataaagagctcaagaaatacaagtggttcctccagttctcgtacttcaagagg
ggccttccacaaatcccatggagccaactggagaaggcagacagggcagaactggtggat
ctgatgatggagatgtgtgatcagcagtctgtggaggtgaccagggaggttttcatggac
atgaacaggactgatctggtgcagaggctgtcggagaccagctcaggacttggagatgac
aaagacaagcaagatgactatgatgaagacaacaaaaaagaatccttgtattgtccaaga
cattcaggaagcttggagcttgagggctgtggaagctgtatggtaatccctcccatccat
tcacctgcactcaaacccgaagtgaacagtacagatgcagatgaggctccaacatacagt
ctacagtctgaggcaggaaactttgaatgcagtgtctctgccttacgctgggtctgtaag
gaaaaggtcagccttaagtaccagttttggtcttgggagggacacatggagaggatggcg
agcagacgatacatgcctgcaggtcccctgatggacatctcagtcatttctgggaagtta
gatgaagtttacctgccgcactggatctgtgttgaagacaacccatcaatattagacagg
tttgcagtcctgcacatagataactgtggagatgttgtggaaaaagtgtctgaggtcaca
ccatcccatgtcaagttatctgaaccagttttctctccaagagcggtcctgataaaattc
ggcattccttgtaaaataaagtgtcaagtgttaatatattatcaacccaacgcatcattc
ctcaaactacatgtatatctgatcccatgtgatcctgctctgaaacagatagtggacaag
aaagaatcctcctatcgttacaaagcaatcataaaaccacacccagacaagtacctgaaa
atgcaccagggattcatcctcacaacagacatggacacagcaaaaattctcccaaagaag
ttaaccctcagatatgacagtcaagacccaaacttctatgaagtgttcatcaagaatcca
gacagaaacttctaccttacactcttgagctcttgcaaaaataaggatgtactagtgtgg
acctgtgaaattcgagaagatgactttccaagctctattcctgtagaagccacgggatcc
tcaggtgaagcaactggtgtaaatactttggctcaagatagctccacagtggatgaagat
ctgtctgaacagttcaacaaggcaacaatcacaccggttagagagaagcttttgaaaatg
ctggaacatttgaaagaggaagagttcaaaggatttaagtggtacctggaggacagtgcc
gtcctgccaggccccacatgcatcccaaaaagcaaactggagaaggcagacaagttagac
ctggtggaactgatgatgcagacctacaaccaacagtgtgtggaggtgaccaagagggtt
ttcaagaaaataaaaaggaatgatctggtgcagatgttgtaa
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integrated database retrieval system
