Lates calcarifer (barramundi perch): 108899620
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Entry
108899620 CDS
T04895
Name
(RefSeq) alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C isoform X1
KO
K13748
alpha-1,3-mannosylglycoprotein beta-1,4-N-acetylglucosaminyltransferase C [EC:
2.4.1.201
2.4.1.145
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00510
N-Glycan biosynthesis
lcf00513
Various types of N-glycan biosynthesis
lcf01100
Metabolic pathways
Module
lcf_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
108899620
00513 Various types of N-glycan biosynthesis
108899620
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108899620
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.145 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase
108899620
2.4.1.201 alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase
108899620
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
N-Glycan
108899620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MGAT4_cons
MGAT4A_C
PGAP4
Motif
Other DBs
NCBI-GeneID:
108899620
NCBI-ProteinID:
XP_018555683
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Position
LG6:complement(2415878..2421505)
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AA seq
548 aa
AA seq
DB search
MKPDLSVRANGVEEGTLSQLNIYLKVTIHLVSHTVLTVRPLSHSLKTPHPFVCGKIILIT
EPYCNCSDERQTKSTIGMEEMRRYSKKKNVLLAVLLLIGGLYFISHPNFLISGLTGSHEQ
IPNELSWQAERLVSKESWVEQGVYLPLNVSYQLLAGAPSTQQRYLSVGLSSVKRKKGSYL
IPTLKSLFSQSSPEERSSMVVVVLLADFDVSWRVATVSEIKTVFASELEQGQLVVLHVPQ
DLYPPLTGLKRNYNDAPERVSFRSKQNLDYSFLIHYSASLGQYYLQLEDDVSSAKNFLTT
IRRHIEEQEVKKTTWAMLEFSALGYIGKLYKSAHLPLLARFLFLFYQEMPCDWLMGHFRE
LLTQKKPILFKPSLFQHMGTFSSFQGTYNKLKDKDFEEGFYSNPPAEVYTDMSTYQKHLP
KLAWDAGEGFFWGRSPEKGNYLTVVFTDPTVVTGIFVETGSGGKDLLESAQVEIGHDVVT
IEKGERSCREFQPLGTLENGRFEMQEMDRKYSSASSCLRIQVTAGQKDWVIIRKIRITKK
LNMLPTQV
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctgatttgtcagtgcgtgcaaacggagtggaggagggcacattgtctcagcta
aatatatatctaaaggttaccatacatctagttagtcatacagtgttgacagtacgtccc
ctgtctcattcactcaaaactccccacccttttgtttgtggtaagattattctgataaca
gagccatactgtaactgcagtgatgaaagacaaacaaagagcacaataggaatggaagaa
atgcgacgttattcaaagaagaagaatgttcttttggcagtgctccttctcattggggga
ttatacttcattagccaccccaacttccttatttctggcctgacagggtcacatgagcag
attccaaatgagttatcttggcaagcggagcgattggtcagcaaggagtcctgggttgaa
cagggagtttacctacctctcaatgtgtcttatcaactgcttgctggagcaccatctact
caacagaggtatttatctgttggattatcatcagtaaagaggaagaagggcagctattta
attcccaccttgaagtccctcttctcccagtcatctcctgaggagcgctcctccatggtg
gtggtagtgctgctagcagattttgacgtcagctggagagtggctacagtgagcgagatc
aagactgtatttgcctccgagctggaacaaggccagctggtggtcctccatgttcctcag
gatttgtaccctccacttacaggtctaaagaggaactacaatgatgctccagaaagggta
tcattccgctccaagcagaacttggattactccttcctgatccactacagtgccagtctt
ggtcagtactacctccagctggaggatgacgtctcctctgccaaaaacttcctgaccacc
atcaggaggcacattgaggagcaagaggtgaagaagaccacttgggcaatgctggaattc
tcagccttgggctacattgggaaactctacaaatcggcccaccttcctctcctggcccgc
ttcctcttcctcttctaccaagaaatgccctgtgactggttgatgggtcactttcgagag
ttgctgactcagaaaaagccaatcctctttaaaccctcgctgttccaacacatggggact
ttctcgtcgttccaagggacatacaacaagctgaaggacaaggactttgaggaggggttc
tacagtaatccgccagctgaagtttacactgatatgtccacctatcagaaacacttaccc
aaactggcctgggatgctggggagggattcttctggggacgctcccctgaaaaaggaaat
tacctgactgtggtgttcaccgaccctacagtagtgacagggatatttgtagaaacaggg
tcaggtggtaaagacctcctggagtctgctcaggtggaaataggccacgacgtggttacc
atcgagaaaggggagaggagttgtagagagttccagccactggggacattagagaatggg
aggtttgagatgcaggagatggacagaaaatatagctctgcctcgtcctgtctgagaata
caagtcacagcagggcagaaggactgggtgatcattaggaaaatcaggatcacaaaaaag
cttaatatgcttccaacccaagtgtag
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