Lates calcarifer (barramundi perch): 108900100
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Entry
108900100 CDS
T04895
Name
(RefSeq) glutamate receptor 2 isoform X1
KO
K05198
glutamate receptor 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108900100
04082 Neuroactive ligand signaling
108900100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108900100
Ion channels [BR:
lcf04040
]
Ligand-gated channels
Glutamate (ionotropic)
108900100
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Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
DUF2061
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
108900100
NCBI-ProteinID:
XP_018556461
UniProt:
A0A4W6CWV9
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Position
LG5:complement(28835842..28940714)
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AA seq
908 aa
AA seq
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MLLWLRVRSINTTMKLLLMVTLLWREALCGSPSVQIGGLFPRGADQEYSAFRVGMVQFGM
ADFRLTPHIDNLEVANSFAVTNCFCSQFSRGVYAIFGFYDKKSVNTITSFCETLHVSFIT
PSFPAEGMNQFVLQMRPDIKGPLVSLVEYYKWEKFAYLYDSDRGLSTLQVILDTAAEKKW
VVTAINVGNLKDERKDEAYRSLFQDLEIRKERRIILDCEQDKVKDIMEQVITIGRHVKGY
HYIIANLGFVDGDLSKIQYGGANVSGFQIVDFDDPVVAKFDQRWEALEEKEYPGADTRIR
YTSALTYDAVHVMTEAFRFLYKQRIDMSRRGNNGDCLANPAVPWAQGVEIERALKQVRVD
GLTGNIQFDQYGKRINYSVTIMELKNNGPVKIGYWNEVDKMVVTKSDLYPNDTMGMENKT
VIVTTILEAPYVMLKKNAELFQDNDRYEGYCVDLAAEIAKHCGIRYQLRIVGDGKYGARD
AETKIWNGMVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV
FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWTLEEPEDGALPLTTESTNEFGIF
NSLWFSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIE
SAEDLAKQTEIAYGTLDSGSTKEFFRRSKIALFDKMWQYMKSAEPSVFVKKTSEGVLRVR
KSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSPLRNAVNLAVLKLN
EQGLLDKLKNKWWYDKGECGSGGGESKEKTSALSLSNVAGVFYILVGGLGLAMMVALVEF
CYKSRAEAKKMKVAANTLSSPQHTGNYTHTLSSPQHAPNFNLLSPSHQPNYATYKEGYNV
YGIESVKI
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtggcttcgcgtgaggagcattaacaccaccatgaagctgctgttaatggtg
acactgttgtggcgcgaggcattgtgcggatctccgagcgtccagatcggtggtttattc
cccaggggtgcagatcaggagtacagtgcattcagagttggcatggttcagtttgggatg
gcagatttcagactgactccacatatagacaacctggaggtggccaacagctttgctgtc
actaactgcttttgttcccagttctctcgaggtgtctatgccatatttggcttctatgac
aagaagtcagtaaacaccatcacatccttctgtgagacacttcatgtctccttcatcaca
ccctcttttccagcagaaggaatgaatcagtttgttctccagatgaggccagacatcaag
gggccactggtttcattagttgaatactacaaatgggaaaagtttgcctatctatacgac
agtgatagaggtctttctactcttcaggtaatactggacactgcagcagagaaaaaatgg
gttgtcacagccataaatgtgggaaacctgaaagacgagaggaaggatgaagcctatcgc
tccctgtttcaggacctggagatccgcaaggagcgacgcatcatcttggactgtgaacaa
gacaaagtcaaagacatcatggaacaggtgatcactataggcaggcatgtaaagggatat
cactatatcatcgccaacttgggttttgtagatggtgacctctctaaaatccagtatgga
ggtgcaaatgtgtctgggtttcaaatagtagattttgatgatcctgtagtagcaaagttt
gaccaacgatgggaggctcttgaagagaaggagtatcctggagctgatacacggatcaga
tatacctcagccctcacctatgacgctgtccacgtaatgactgaggcattccgcttcctt
tataagcagagaatagatatgagtcgtcgtggcaacaatggggactgtctggccaatcca
gctgtaccctgggcacagggggtggagattgaacgtgccctcaaacaggtgcgtgtagat
ggtttaacagggaacattcagtttgaccagtacgggaagagaatcaactactctgtgaca
atcatggagctgaagaataatggacctgttaagattggctattggaatgaggtggataag
atggtggtgacaaagtcagacctttaccctaatgacaccatgggaatggaaaacaagaca
gtcattgtcacaactattttggaagccccctatgtgatgctgaagaaaaatgctgagcta
tttcaagacaatgaccgttatgaaggttattgcgtcgacctggctgcagagattgcaaag
cactgtggtatacgctaccagttaaggattgtgggagatggcaaatacggagcaagagat
gcagaaaccaagatctggaatggtatggttggagagctggtgtatgggaaagcagatata
gcagttgctcccctgacaatcactcttgttcgagaggaggtgatagatttctccaaaccc
ttcatgtctttgggaatctccatcatgatcaaaaagccacagaaatccaaaccaggagtc
ttctcttttctggacccactggcctatgaaatctggatgtgcattgtctttgcctacata
ggagttagtgttgtactctttctggtatccagattcagcccctatgagtggacattagag
gagccagaggatggagcattgccgctaacaaccgaatccaccaatgagtttgggattttt
aactccctttggttctctttgggtgcttttatgcggcagggttgtgacatctcaccaagg
tctctgtcaggtcgtatagttgggggtgtgtggtggtttttcacgctgatcatcatttca
tcatatactgccaacctggctgcctttctgactgtggagaggatggtttctcccatcgag
agtgctgaagacctggctaaacagacagagatagcatatggaaccctggactctggatcc
actaaggagttctttaggcgctctaaaatcgccttatttgacaagatgtggcagtacatg
aaatcagcagaaccttccgtctttgtcaagaaaacatcggagggtgttttgcgtgtcagg
aaatccaaagggaagtatgcctacctgctggaatccaccatgaacgagtacattgagcag
aggaaaccctgtgacaccatgaaagtgggaggaaacctggactccaagggctacggcatt
gccacgcccaaaggatccccattaagaaatgcggtgaacctggcggtgttaaagttgaac
gagcaggggctgctggacaaactgaaaaacaagtggtggtatgacaagggagaatgcggc
agcggaggaggggagagcaaggagaagaccagtgctctgtctcttagtaatgtagcaggg
gtgttctacatcctcgttggaggtctgggtctggccatgatggtagcgctggtagagttc
tgctacaagagtcgtgctgaggccaaaaaaatgaaggtggcagccaacaccttgtcgtcc
ccccagcacacagggaactacacacacactctgtcttctcctcaacatgcccccaacttc
aacctgctgtcccccagccaccagccaaactacgccacctataaagagggctacaacgtt
tacggcattgaaagcgtcaagatctaa
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