KEGG   Lates calcarifer (barramundi perch): 108900100
Entry
108900100         CDS       T04895                                 
Name
(RefSeq) glutamate receptor 2 isoform X1
  KO
K05198  glutamate receptor 2
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04080  Neuroactive ligand-receptor interaction
lcf04082  Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    108900100
   04082 Neuroactive ligand signaling
    108900100
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:lcf04040]
    108900100
Ion channels [BR:lcf04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   108900100
SSDB
Motif
Pfam: Lig_chan ANF_receptor Lig_chan-Glu_bd SBP_bac_3 DUF2061 Peripla_BP_6
Other DBs
NCBI-GeneID: 108900100
NCBI-ProteinID: XP_018556461
UniProt: A0A4W6CWV9
LinkDB
Position
LG5:complement(28835842..28940714)
AA seq 908 aa
MLLWLRVRSINTTMKLLLMVTLLWREALCGSPSVQIGGLFPRGADQEYSAFRVGMVQFGM
ADFRLTPHIDNLEVANSFAVTNCFCSQFSRGVYAIFGFYDKKSVNTITSFCETLHVSFIT
PSFPAEGMNQFVLQMRPDIKGPLVSLVEYYKWEKFAYLYDSDRGLSTLQVILDTAAEKKW
VVTAINVGNLKDERKDEAYRSLFQDLEIRKERRIILDCEQDKVKDIMEQVITIGRHVKGY
HYIIANLGFVDGDLSKIQYGGANVSGFQIVDFDDPVVAKFDQRWEALEEKEYPGADTRIR
YTSALTYDAVHVMTEAFRFLYKQRIDMSRRGNNGDCLANPAVPWAQGVEIERALKQVRVD
GLTGNIQFDQYGKRINYSVTIMELKNNGPVKIGYWNEVDKMVVTKSDLYPNDTMGMENKT
VIVTTILEAPYVMLKKNAELFQDNDRYEGYCVDLAAEIAKHCGIRYQLRIVGDGKYGARD
AETKIWNGMVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV
FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWTLEEPEDGALPLTTESTNEFGIF
NSLWFSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIE
SAEDLAKQTEIAYGTLDSGSTKEFFRRSKIALFDKMWQYMKSAEPSVFVKKTSEGVLRVR
KSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSPLRNAVNLAVLKLN
EQGLLDKLKNKWWYDKGECGSGGGESKEKTSALSLSNVAGVFYILVGGLGLAMMVALVEF
CYKSRAEAKKMKVAANTLSSPQHTGNYTHTLSSPQHAPNFNLLSPSHQPNYATYKEGYNV
YGIESVKI
NT seq 2727 nt   +upstreamnt  +downstreamnt
atgctgctgtggcttcgcgtgaggagcattaacaccaccatgaagctgctgttaatggtg
acactgttgtggcgcgaggcattgtgcggatctccgagcgtccagatcggtggtttattc
cccaggggtgcagatcaggagtacagtgcattcagagttggcatggttcagtttgggatg
gcagatttcagactgactccacatatagacaacctggaggtggccaacagctttgctgtc
actaactgcttttgttcccagttctctcgaggtgtctatgccatatttggcttctatgac
aagaagtcagtaaacaccatcacatccttctgtgagacacttcatgtctccttcatcaca
ccctcttttccagcagaaggaatgaatcagtttgttctccagatgaggccagacatcaag
gggccactggtttcattagttgaatactacaaatgggaaaagtttgcctatctatacgac
agtgatagaggtctttctactcttcaggtaatactggacactgcagcagagaaaaaatgg
gttgtcacagccataaatgtgggaaacctgaaagacgagaggaaggatgaagcctatcgc
tccctgtttcaggacctggagatccgcaaggagcgacgcatcatcttggactgtgaacaa
gacaaagtcaaagacatcatggaacaggtgatcactataggcaggcatgtaaagggatat
cactatatcatcgccaacttgggttttgtagatggtgacctctctaaaatccagtatgga
ggtgcaaatgtgtctgggtttcaaatagtagattttgatgatcctgtagtagcaaagttt
gaccaacgatgggaggctcttgaagagaaggagtatcctggagctgatacacggatcaga
tatacctcagccctcacctatgacgctgtccacgtaatgactgaggcattccgcttcctt
tataagcagagaatagatatgagtcgtcgtggcaacaatggggactgtctggccaatcca
gctgtaccctgggcacagggggtggagattgaacgtgccctcaaacaggtgcgtgtagat
ggtttaacagggaacattcagtttgaccagtacgggaagagaatcaactactctgtgaca
atcatggagctgaagaataatggacctgttaagattggctattggaatgaggtggataag
atggtggtgacaaagtcagacctttaccctaatgacaccatgggaatggaaaacaagaca
gtcattgtcacaactattttggaagccccctatgtgatgctgaagaaaaatgctgagcta
tttcaagacaatgaccgttatgaaggttattgcgtcgacctggctgcagagattgcaaag
cactgtggtatacgctaccagttaaggattgtgggagatggcaaatacggagcaagagat
gcagaaaccaagatctggaatggtatggttggagagctggtgtatgggaaagcagatata
gcagttgctcccctgacaatcactcttgttcgagaggaggtgatagatttctccaaaccc
ttcatgtctttgggaatctccatcatgatcaaaaagccacagaaatccaaaccaggagtc
ttctcttttctggacccactggcctatgaaatctggatgtgcattgtctttgcctacata
ggagttagtgttgtactctttctggtatccagattcagcccctatgagtggacattagag
gagccagaggatggagcattgccgctaacaaccgaatccaccaatgagtttgggattttt
aactccctttggttctctttgggtgcttttatgcggcagggttgtgacatctcaccaagg
tctctgtcaggtcgtatagttgggggtgtgtggtggtttttcacgctgatcatcatttca
tcatatactgccaacctggctgcctttctgactgtggagaggatggtttctcccatcgag
agtgctgaagacctggctaaacagacagagatagcatatggaaccctggactctggatcc
actaaggagttctttaggcgctctaaaatcgccttatttgacaagatgtggcagtacatg
aaatcagcagaaccttccgtctttgtcaagaaaacatcggagggtgttttgcgtgtcagg
aaatccaaagggaagtatgcctacctgctggaatccaccatgaacgagtacattgagcag
aggaaaccctgtgacaccatgaaagtgggaggaaacctggactccaagggctacggcatt
gccacgcccaaaggatccccattaagaaatgcggtgaacctggcggtgttaaagttgaac
gagcaggggctgctggacaaactgaaaaacaagtggtggtatgacaagggagaatgcggc
agcggaggaggggagagcaaggagaagaccagtgctctgtctcttagtaatgtagcaggg
gtgttctacatcctcgttggaggtctgggtctggccatgatggtagcgctggtagagttc
tgctacaagagtcgtgctgaggccaaaaaaatgaaggtggcagccaacaccttgtcgtcc
ccccagcacacagggaactacacacacactctgtcttctcctcaacatgcccccaacttc
aacctgctgtcccccagccaccagccaaactacgccacctataaagagggctacaacgtt
tacggcattgaaagcgtcaagatctaa

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