KEGG   Lates calcarifer (barramundi perch): 108900792
Entry
108900792         CDS       T04895                                 
Name
(RefSeq) beta-1,4-galactosyltransferase 1
  KO
K07966  beta-1,4-galactosyltransferase 1 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf00052  Galactose metabolism
lcf00510  N-Glycan biosynthesis
lcf00513  Various types of N-glycan biosynthesis
lcf00514  Other types of O-glycan biosynthesis
lcf00515  Mannose type O-glycan biosynthesis
lcf00533  Glycosaminoglycan biosynthesis - keratan sulfate
lcf00601  Glycosphingolipid biosynthesis - lacto and neolacto series
lcf01100  Metabolic pathways
Module
lcf_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
lcf_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    108900792
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    108900792
   00513 Various types of N-glycan biosynthesis
    108900792
   00515 Mannose type O-glycan biosynthesis
    108900792
   00514 Other types of O-glycan biosynthesis
    108900792
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    108900792
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    108900792
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:lcf01003]
    108900792
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108900792
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcf04147]
    108900792
Enzymes [BR:lcf01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     108900792
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     108900792
    2.4.1.90  N-acetyllactosamine synthase
     108900792
Glycosyltransferases [BR:lcf01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   108900792
Membrane trafficking [BR:lcf04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    108900792
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   108900792
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C CHGN
Other DBs
NCBI-GeneID: 108900792
NCBI-ProteinID: XP_018557544
UniProt: A0A4W6DFF0
LinkDB
Position
LG24:complement(8226868..8232320)
AA seq 354 aa
MLKKLFNALALFAFLSLACYVVFLLYNKNSTITYIIKPYHVANGNNAAFWKIEKYEIETE
ATNVSQEKTQTTTTTTTRKPLDPCPDNPPNLIGPLAVDFNYTLNLDRVRTDVSSSLQDGG
RYKPPDCIAKQKVAIIIPFRNRHEHLKYWMYYLHPILMRQQLDYGVYVINQDGEGVFNRA
KLMNVGYAEALKDYNYECFVFSDIDLVPIDDRNLYRCFDNPRHLAVAMDKFNFQLPYNTY
FGGVSSLSKDQYLKINGFPNAYWGWGGEDDDIYKRIIFRGMSISRPNLVLGRYKMIKHKR
DLHNEANPKNPDKLGKTQWTMDKDGINSLQYTVKEIVRDILYTWITVDIQAPEN
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgctgaaaaaactcttcaatgccctggcactttttgctttcctcagcctggcatgttat
gttgtatttttgttatacaacaaaaacagcactataacttacattattaagccgtatcat
gtggcaaatggaaataacgccgctttttggaagatagaaaaatatgaaattgagactgaa
gccacaaatgtcagccaagagaagacacagacgactacgaccaccactacaagaaaacct
ctggatccctgccctgacaacccgccaaatcttattgggcctctcgctgtggactttaat
tatacactgaatttggatagggtgagaacagatgtcagttcttcccttcaggatggagga
cggtataagccaccagactgtatcgccaaacaaaaggtggcaatcatcatcccattccga
aatcggcacgagcacctgaaatactggatgtactacctccatcctatattgatgcgacag
cagttggactacggtgtatatgtcatcaaccaggatggagagggagtgttcaaccgggct
aaactaatgaatgtaggctatgctgaggcactgaaggactataattatgaatgctttgtc
ttctctgacatcgacctggttcccatagatgaccgtaacctttatagatgttttgacaat
cccagacacctggctgtggctatggacaaatttaacttccagttaccctataacacctat
tttggtggggtttcctcattgtccaaggaccagtacttaaagattaatggcttcccgaat
gcttactggggctggggcggtgaggacgatgatatctataagcgaattatcttccgtgga
atgtccatttctcggcccaacttggtgttgggaaggtacaaaatgatcaaacataaaaga
gacttgcacaatgaggctaatccaaagaatcctgacaaactgggcaaaacccagtggacc
atggataaagatgggattaattccctccaatacacagtcaaggagattgtgagggatata
ctgtacacttggatcactgtggatattcaagctccagaaaattga

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