Lates calcarifer (barramundi perch): 108900798
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Entry
108900798 CDS
T04895
Symbol
tnfrsf11a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108900798 (tnfrsf11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
lcf04050
]
108900798 (tnfrsf11a)
04090 CD molecules [BR:
lcf04090
]
108900798 (tnfrsf11a)
Cytokine receptors [BR:
lcf04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
108900798 (tnfrsf11a)
CD molecules [BR:
lcf04090
]
Proteins
108900798 (tnfrsf11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
108900798
NCBI-ProteinID:
XP_018557552
UniProt:
A0AAJ7QJE7
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Position
LG24:8743287..8757592
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AA seq
660 aa
AA seq
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MRLNFSTSWIFRGWITCVLVTFYAQNAVSKSPQCDETEYIKGHRCCKKCEPGQRVLTDCN
DSHQTICTPCGRGEYQPSLTSEKRCFQQRFCDPDSGFMERPENPLAEEPCRCLPHLQCCP
INCEFCEAIPTCSAGYGLVVDPKFTNGRKICAPCKKGFFSADNSAEECKQWTNCKAEGRR
EIHPGSAQADVVCGTLVSGAEPSWVIVSVLSVITVLCLLILLLFCYKDKLKLLSVNLRSC
VQNLKRTRIQQETLAPLYHSGGPKCTPCETTKLICQAPHSPTDEPPCTFPTSVPDVKVSL
PFTGEMTEKDGNNRGTVIGDQSEASGEPEEVSEEEEVVSVSPLLAGSCVCVIPIREPLEV
GENEDCSQAVNPGTPVTCSCGGLEGERDGDESGRGEKSESGGEDNGGKKGDENQEKMVLC
KSETGAASLVSLSPPLLHTSSVVPRSSPLPELCLPLSQAQVTPEFKPYLTDRSLVKQEGL
YRLASMDSTSTENSSTSVMTSVSPLMTSSSVGDLYLDKPPEASSPEQGQGLSWEDSSGNK
LSSGESELECSPESLHSQLAEPTLTSGQVSGNHNTTFISSGQVMNFSGDVIVVYVSQTSV
GSDGAGQDDAFGSPVQEEANETVPFFQSSLRSRGDSVSHITLQDETLPVQEVMEERPQGK
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgagactgaacttttctacaagttggatattccgaggctggataacgtgcgtgctggtc
accttttacgcacagaatgcagtctccaaatctccccaatgtgatgaaacagaatacata
aaaggccacagatgctgcaagaagtgtgaaccaggccagcgtgtgcttaccgactgtaat
gattcccatcagaccatatgcactccatgtggtcgtggtgaataccagcccagcttgacc
agcgagaagcgctgtttccagcagaggttctgtgacccagacagtggttttatggagagg
cctgaaaaccctctggcagaggagccatgtcgctgccttccccacctccaatgctgtccc
atcaactgtgagttctgcgaggcgatacccacctgcagtgctggatatgggctcgtagtg
gatcctaagtttactaatggaaggaagatctgtgctccatgtaagaagggtttcttctct
gctgacaacagtgctgaagaatgcaaacaatggactaattgtaaggctgagggaaggaga
gagatacatccaggcagcgctcaggccgatgtagtgtgtggaacacttgtatctggtgca
gagccctcctgggtcatagtttcagttctgtcagtcatcactgttctgtgtctcctcatc
ctgctcctcttctgctacaaggacaaactgaaattactctctgtgaatctgcgatcctgt
gtccagaatctgaagaggacgaggatacagcaggagaccttggcccctctttaccatagt
ggaggtcccaagtgtacaccatgtgagacaaccaaactcatctgccaagcaccacacagc
cccacagatgagcccccatgcacattccccacttctgttcccgatgtcaaggtctcactg
ccattcacaggggagatgacagagaaagatggaaacaacagggggacagtgattggggat
caaagtgaagcatctggagaaccagaggaggtgtcagaagaagaggaggttgtgagtgtg
tctcctcttttggcgggttcttgtgtgtgtgtcattcccattcgcgagccactggaagta
ggggagaatgaggactgtagccaggctgtcaaccctgggactccagtgacctgctcatgt
ggtgggctagaaggagagagggatggagatgagagtgggagaggagagaagagtgagagt
ggaggggaagacaatggtggaaaaaagggtgatgaaaatcaagaaaagatggttttgtgc
aagagtgagacaggtgctgcatctcttgtgtctctttctcctcctctcctccacacctcc
tctgtagtccctcgatccagtccacttcctgaactctgcctgccattgtcccaggctcag
gtgacaccggagttcaaaccttacctgactgacaggtcactggtaaaacaggagggatta
tacagactggcaagcatggactccacctcaacagagaatagttcaacctctgtgatgacc
tcagtcagccccttgatgacctcctcatctgtaggagatctctacctggacaagccccct
gaggcctctagcccggagcaaggccagggactttcctgggaggacagtagtggaaacaag
ctctcctctggggagtcagagctggagtgctcgcctgagagcctccatagtcagctggct
gagccaactcttacctcaggtcaggtgtctgggaaccacaacaccaccttcatctccagc
ggtcaggtgatgaacttcagcggtgatgtcattgttgtctatgtaagccagacgtctgtt
ggcagcgacggggcagggcaggacgatgcctttggaagccccgtccaggaagaggccaat
gagacagttccatttttccagagcagtctgaggtcacgaggggattccgtttcccacatc
acgctgcaagacgagacgctgccagtccaagaagtgatggaggagcggccacagggaaag
tga
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