Lates calcarifer (barramundi perch): 108900824
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Entry
108900824 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: fukutin-related protein
KO
K19873
fukutin-related protein [EC:2.7.8.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00515
Mannose type O-glycan biosynthesis
lcf01100
Metabolic pathways
Module
lcf_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
108900824
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108900824
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108900824
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
O-Glycan
108900824
Membrane trafficking [BR:
lcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108900824
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FKRP_N
LicD
Motif
Other DBs
NCBI-GeneID:
108900824
NCBI-ProteinID:
XP_018557582
UniProt:
A0AAJ7VJT1
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Position
LG21:12208887..12213530
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AA seq
532 aa
AA seq
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MRISFCQGLLTGAIILNLLILYYVSRAQQQMMEKRKELGRGTRRAALPASGLGGGLGILA
GAGGEPGVVGVEGHGRGPRVTVLLREFENFENYVGDVANSFLRQRPELPFLAVADMPPYP
PLLLPEGARLLVLSPSPDQPPQAHRPEFHIQTEFVLLVPDGVELEQPRAIERLIRELEGE
GGGPVRLVAAPVLARSAVQCLHLRVNLREWTATYSPAASGSSGSVCTALQGDAIVLIRTE
DLFNLSVPLGRPLFSSLFIQTSLRGWKVKLLESPCFSANHRPLFSSAHNQWKADTRLKEA
TGKLMRSFGLKRLMLPDGKEQWYGCSKETPRCFGTVQDDTPDYLYLDRWTPPCCLRALRE
TTKYVINILESSGVRYWLEGGTLLGAVRHQDIIPWDYDVDLGIYLEDVPNCDHLKNLDSG
SLVDANGYVWERAVEGDFYRVQYSEANHLHVDLWPFYPRNGVMTKDTWTEHKQDVEFPEH
FLQPLVPMPFAGITAYGPNNHRGFLELKFGEGVIENPQYPNPSKKRLERSKL
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcagtttctgccagggcctgttaactggcgccatcatcctcaacctcctcatt
ctctactatgtgtcccgggcccaacagcagatgatggaaaagcggaaggaacttggtagg
ggtacaaggagggctgccctaccagcctctggtctcgggggaggcctagggatacttgca
ggagctggaggtgagcctggagtggtcggagtggaggggcacggccgcggcccacgtgtg
actgttcttctccgggagtttgaaaactttgagaattacgttggggacgtggctaattcc
ttcctccgccagagacccgagcttcccttcctggctgttgctgacatgcctccttaccct
cccctgctgcttccagaaggggctcggcttctagtgctctcccccagcccggaccagcct
ccgcaagctcacaggccagagttccacatccagacagagtttgtcctgctggtgcctgat
ggggtggagctggagcaacctcgggccattgagaggctgatcagggagttggaaggtgag
ggcggtgggcctgtgaggctggtagcagcgcccgtgctggctcgatccgctgtgcagtgt
ctccacctgcgggtgaacctcagagagtggacggccacctactcgccggctgcgtctggg
agcagcgggagcgtgtgtacggctttgcaaggagatgccattgtccttattcgcaccgag
gatctttttaacctctctgtccctctggggcggccgctcttctcctcgctcttcatccag
acgtccttgagaggctggaaggtcaagctgctggagagcccctgtttctccgcaaaccac
cggcccctcttcagctccgctcacaaccagtggaaagccgacactcgactgaaggaggcc
actgggaagctcatgaggagctttggtctcaagcgcctcatgctgcctgatgggaaggaa
cagtggtacggctgcagtaaagagacacctcgctgctttggtactgtgcaggatgacact
ccggactacctctatctggatcgctggacacctccctgctgcctgcgagcactcagggaa
accactaagtacgttatcaacatcctggagagctctggcgtgcgctactggctggaggga
gggactctgcttggcgctgtccgccatcaagacatcatcccatgggattacgacgtggac
ctgggcatctacctggaggatgtccccaactgcgatcacctaaagaacctggactcgggc
tctcttgtggatgctaacggctacgtctgggagcgcgcagtggaaggagacttctacaga
gtgcagtatagcgaagccaaccacctgcacgttgacctgtggccgttctatccgcgcaat
ggcgtcatgacgaaggacacgtggacagagcacaaacaagacgtggagttccctgagcac
ttcctgcaacctctggtgcccatgcccttcgctggcatcacagcctatggccccaacaac
caccgaggcttcttggagctcaagtttggagagggtgtgattgagaacccccagtacccc
aacccttcaaaaaagaggctggagagaagcaaattatga
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