Lates calcarifer (barramundi perch): 108901294
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Entry
108901294 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: protein DVR-1
KO
K22672
growth differentiation factor 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108901294
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcf04052
]
108901294
Cytokines and neuropeptides [BR:
lcf04052
]
Cytokines
Transforming growth factors (RSTK binding)
108901294
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
ARMET_C
Phospholipase-like
Motif
Other DBs
NCBI-GeneID:
108901294
NCBI-ProteinID:
XP_018558266
LinkDB
All DBs
Position
LG1:complement(23401561..23403886)
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AA seq
376 aa
AA seq
DB search
MARLLLLAVSLLCVCDLSRVEEMKSQERLFLSSLGLSERPRPPGGRQTRRHVPSALWKMF
RSSEKIQTQESDPCTVSEYGVRGNIIRYVQDQGRVVSGWSSSCQACLEKQLFFNMSVLQP
VELLSLAQLEVKFHWKPFRSAELLQGHRGLSVSLYKVIRATLRGADPRANRRLLLSQSVQ
LQPEPASITMDLSSLAENWRKPGRNYGLVLELLPLDADPEELLPFHPGNSLPLEPAFTLP
LIQASLVAVSLNPHQCRSRRRRSAVHLPVTPSNVCKARRLYIDFKDVGWQDWIIAPQGYM
ANYCHGECPFPLSESLNGTNHAILQTLVHSLDPHGTPQPCCVPIRLSPISMLYYDNNDNV
VLRHYQDMVVDECGCR
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtttgctgctccttgccgtgagtttactgtgtgtgtgtgatctctcacgcgtg
gaggagatgaagagccaggagcggctcttcctcagctccctgggcctctcagagcgaccg
cgacccccggggggccgtcagaccaggcgccacgtcccctccgcgctctggaagatgttc
cggagttcagagaagatccagacccaggagagcgacccctgcacggtgtccgagtacgga
gtccgcgggaacatcatccgatacgtgcaagaccaaggcagggttgtgtctgggtggagc
agcagctgtcaggcctgtctggagaagcagcttttcttcaacatgtccgtcctgcagcct
gtggagctgctatctctggctcagctggaagtcaagttccactggaaacccttcagatct
gcagagctcctgcaggggcaccggggcctcagcgtgtctctgtataaagtgatccgagcc
acgctaaggggagctgatcctcgggccaaccgcagactcctgctgtctcagtcggtccag
ctgcagcctgaaccggcctccatcaccatggacctcagctcactggcggagaactggcgc
aaaccgggacgcaactatggtttggttttagagctgcttcctcttgatgcagatccagag
gagcttcttccctttcaccctgggaactccctgccattggaaccggctttcactctgccg
ctgatccaggcctcgctggtggccgtgtccctcaacccccaccagtgtcgctccagacgg
aggaggagcgccgtccacctccccgtgacacccagcaatgtgtgcaaggcccgacgcctc
tacattgacttcaaagatgtgggttggcaggactggatcatcgctccgcagggctacatg
gccaactactgccacggtgagtgcccattcccactcagtgagagcctgaacggcaccaac
cacgctatcctacagaccctggtgcactccctggacccgcacggcacacctcagccctgc
tgtgtccccatccgcctctccccgatctccatgctctactacgacaacaacgacaacgtg
gtgctgcgacattaccaggacatggtggtggacgagtgtggctgtcgatga
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