Longicatena caecimuris: L3BBH23_19240
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Entry
L3BBH23_19240 CDS
T07231
Symbol
vanB
Name
(GenBank) vancomycin B-type resistance protein VanB
KO
K15739
D-alanine---(R)-lactate ligase [EC:
6.1.2.1
]
Organism
lcg
Longicatena caecimuris
Pathway
lcg01502
Vancomycin resistance
lcg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lcg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L3BBH23_19240 (vanB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
L3BBH23_19240 (vanB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
lcg01504
]
L3BBH23_19240 (vanB)
Enzymes [BR:
lcg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.2 acid-alcohol ligases (ester synthases)
6.1.2.1 D-alanine---(R)-lactate ligase
L3BBH23_19240 (vanB)
Antimicrobial resistance genes [BR:
lcg01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
L3BBH23_19240 (vanB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
ATP-grasp_4
CPSase_L_D2
ATP-grasp_LDMS
RimK
GARS_A
Chal_sti_synt_C
Ins134_P3_kin
TTL
Motif
Other DBs
NCBI-ProteinID:
BCT45479
LinkDB
All DBs
Position
complement(2062300..2063331)
Genome browser
AA seq
343 aa
AA seq
DB search
MYKINVAVLFGGCSEEHTVSIKSAIELAANIDTGKYQPFYIGITKSGVWKLCEKPCLDWE
RYAKYPVVFSPGRNTHGLLIQKDDGYEIQPVDVVFPMIHGKFGEDGSIQGLLELSGIPYV
GCDIQSSVICMDKSLAYTVVKNAGIEAPNFQLIQDGGSPETEKFSFPLFVKPARSGSSFG
VNKVDKAEDLCAAINEAKQYDRKVLIEQAVSGSEVGCAVLGNGTDLIVGEVDQISLKHGF
FKIHQEAQPEKGSENATIKVPADLPTKVREQIQETAKKIYQTLGCRGLARIDLFLREDGQ
IVLNEVNTMPGFTSYSRYPRMMTAAGFTLSELIDRLIELALRR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtataagataaacgttgcggtcctgtttgggggctgctcagaggaacatactgtctcg
ataaaatctgcaatagagcttgccgcaaacatagatacgggaaaatatcagcctttttat
attgggatcacaaaatccggcgtttggaaactgtgcgaaaagccctgcctggattgggaa
cgatatgcaaaatatccggtcgtcttttcgccgggaagaaatacgcatggcctgctgata
caaaaagatgatggatatgaaatacagcctgtggatgtagtatttccaatgattcatggc
aaatttggggaagatggatcaatacaggggctgctcgaactgtcgggtattccttatgtt
ggctgtgatattcaaagttccgtgatttgcatggacaaatcgcttgcttataccgttgta
aaaaatgcaggtatcgaagcccccaatttccagctcatccaggacggcggcagcccggaa
acagagaagtttagttttcccctttttgtgaaacctgcacgctctggttcttcctttggc
gtaaacaaggtagataaagcggaggatttatgtgcagcgataaatgaagcaaagcaatat
gacagaaaagtattgatcgagcaggcggtttccgggagtgaggtcggctgcgccgtattg
ggaaatggtactgacttaattgttggcgaggtcgatcagatcagcctgaaacacggattc
tttaagattcaccaggaagcacagccagaaaaggggtctgaaaatgcaacgatcaaagtt
ccggctgaccttccgacaaaggtaagggaacagattcaggaaacagctaagaagatttat
cagacacttgggtgcagaggcttggcccgcattgacctgtttttgcgggaggacgggcaa
attgtcctcaatgaagtgaataccatgcctggttttacttcgtatagccgctatccccgc
atgatgactgcggcaggctttaccctttcggaactcattgaccgtttgattgaactggct
ctcaggaggtaa
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