KEGG   Leptothrix cholodnii: Lcho_0862
Entry
Lcho_0862         CDS       T00681                                 
Name
(GenBank) TRAG family protein
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
lch  Leptothrix cholodnii
Pathway
lch03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lch00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Lcho_0862
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lch02044]
    Lcho_0862
Enzymes [BR:lch01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Lcho_0862
Secretion system [BR:lch02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   Lcho_0862
SSDB
Motif
Pfam: T4SS-DNA_transf TrwB_AAD_bind TraG-D_C Orexin
Other DBs
NCBI-ProteinID: ACB33134
UniProt: B1Y1V4
LinkDB
Position
complement(925925..927958)
AA seq 677 aa
MSNVHAWIPAGHWPAWLTPRRAAGIGFGLAAFVVLSVAAIYLSAALFLLLNKVDPRRVEL
TSLWTYWAVYSPDPAQRKRLLASMTASGIGLLLVLPGALLVAAQPRRRLHGDARFATTAE
ITRAGLLGGSTDGRPGILIGRHRGQFISLSGQLSVMLSAPTRSGKGVGVVIPNLLNWPDS
VVVLDIKGENHAVTAGFRAKSGQRVYAFAPFDDQARSHRWNPLTAVRTSPMHRVGDLLAI
GQVFYPNDGSGTSSEAFFNDQARNLFLGLGLLLLETPALPRTIGELLRQSSGKGRALRDH
LADQIRGRRIDSKELGPALSDECIDALQRLLSNSENTLSSIVATFNAPLTIFADAVVDAT
TSADDFRFEDVRRQRLSIYVHIPPNRLTSARPLLNLFFSQLVSLNTQQLPEHDPSLTVQC
LLVNDEFTTMGRVGVITMSAAFLAGYNLRLLTVVQAMSQLDAVYGDKEARTFATNHGLQI
LFAPREQRDADEYSAMLGHFTERGTSRGHSRSLGPNGSRSVSVNESEQRRALLLPQEFKE
LGSERLVVIAENCKPVLGEKIRYHRDPAFTSRLLPPPEVPALDMDLHLARVQQRWRLVEG
DLAPDETVSIERLAHDINQLPDHFTELSAQQMADACLDFFSEKEAQPSGGTVEAAADEEG
VLISNDVAREAAPTPDA
NT seq 2034 nt   +upstreamnt  +downstreamnt
atgagcaacgtccacgcctggattcctgctggtcattggcctgcctggctgaccccgcgc
cgagcggcagggatcgggttcggactggccgcattcgtggtgctgtcggtcgcggcgatc
tacctctcggccgccctgttcctgctgctgaacaaggtcgatccacgccgggtcgagttg
accagcctgtggacctactgggcggtctacagcccggacccggcgcagcgcaagcgcttg
ttggcctcgatgacggcctcgggcatcggcctgctgttggtgctgcccggtgcgctgctg
gtggcggcgcaaccacgccgtcggctgcacggcgatgcccgcttcgcgaccacggccgag
atcacgcgtgccggcctgctggggggttcgaccgatggccggcccggcatcctgatcggc
cggcaccgggggcagttcatcagcctgagcggccagctctcggtgatgctgtcggccccg
acccgcagcggcaagggcgtcggggtggtgatccccaacctgctgaactggcccgactcg
gtggtggtgctggacatcaagggcgagaaccacgcggtcacggcgggcttccgggcgaag
agcggccagcgggtctatgccttcgcgcccttcgacgaccaggcccgcagccaccgctgg
aatccgctgacggcggtgcgcacgagcccgatgcaccgggtcggcgacctgctcgcgatc
ggccaggtgttctatcccaacgacggcagcggcacctcgtcggaagccttcttcaacgac
caggcgcgcaacctcttcctcgggctgggcctgctgttgctggagacccctgccttgcct
cgcacgatcggagagctgctgcggcagtcctcgggcaagggccgtgcactacgcgaccac
ctggccgaccagatccggggccggcggatcgacagcaaggaactgggccccgccctgtcc
gacgagtgcatcgacgcgctgcagcgcctgctgtcgaactcggagaacacgctgtccagc
atcgtcgcgaccttcaacgcaccgctgacgatcttcgcggacgcggtggtcgatgcgacg
accagcgccgacgacttccggttcgaggacgtgcggcgccagcgcctgtcgatctacgtg
cacatcccgccgaaccggctgacgagcgcgcgcccgctgctcaacctgttcttctcgcag
ctggtcagcctcaacacccagcagctacccgagcacgaccccagcctgacggtgcagtgc
ctgctggtcaacgacgagttcacgaccatgggccgggtcggagtgatcacgatgtcggcg
gccttcctcgcgggctacaacctgaggctgctgacggtggtgcaggcgatgtcgcagctg
gacgcggtctacggcgacaaggaggcccgcaccttcgcgaccaatcacgggctgcagatc
ctgttcgcgccacgcgagcagcgtgacgccgacgagtacagcgcgatgctggggcacttc
accgagcggggcacctcgcgtgggcacagccggtcgttggggccgaatggcagtcgatcg
gtcagcgtcaacgagagcgagcagcgccgtgcgctgttgctgcctcaggagttcaaggaa
ctcggcagcgagcgcctggtagtgatcgccgagaactgcaagcccgtcctgggcgagaag
atccgctaccaccgcgacccggcgttcaccagccggctgctgccgccgcccgaggtgccg
gcgctggacatggacctgcacctggcgcgtgtgcagcaacgctggcgcttggtcgagggg
gacctggcgccggacgagacggtgtccatcgagcggttggcccacgacatcaaccagttg
ccggaccacttcacggagctgtcggcacagcagatggccgacgcctgcctggacttcttc
tcggaaaaagaagctcagcccagcggcggcaccgtcgaagccgcggccgacgaggaaggc
gtcctgatctcgaacgacgtcgcccgagaagcggcccctacacccgatgcctga

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