Leptothrix cholodnii: Lcho_1969
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Entry
Lcho_1969 CDS
T00681
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lch
Leptothrix cholodnii
Pathway
lch01501
beta-Lactam resistance
lch01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Lcho_1969
01503 Cationic antimicrobial peptide (CAMP) resistance
Lcho_1969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lch03036
]
Lcho_1969
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_1969
01504 Antimicrobial resistance genes [BR:
lch01504
]
Lcho_1969
Chromosome and associated proteins [BR:
lch03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Lcho_1969
Transporters [BR:
lch02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Lcho_1969
Antimicrobial resistance genes [BR:
lch01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Lcho_1969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
YknX_C
HH_MFP_RND
Beta-barrel_RND
BSH_CzcB
RND-MFP_C
HH_CzcB
HH_EMRA
BSH_LcnD
Motif
Other DBs
NCBI-ProteinID:
ACB34236
UniProt:
B1Y1D7
LinkDB
All DBs
Position
complement(2136794..2138050)
Genome browser
AA seq
418 aa
AA seq
DB search
MKITQKLVALVGLVALAGAAYWVQNRPAGTSPVAGEAAAGGPVAGAGSGAAKGAQGRSGN
AGGPAPVEVGQVVLRRLDDDVHAVGSLRSNQGVMMRPEVAGRIMKIGFQDGQRVRRGQLL
IQLDDTLQQAQLQQARAQAGIANTNLQRSQELAAEKFVSQSAVDQAAANVAVADAQVRLV
EAQLARMRVLAPFDAMAGIRLINVGDFVKDGADLINLEDTSSMWLDYRLPERVLGRLRRG
AVIEAEMDAFPGQQFKGQVEAIDAQVDANGRALLVRARVNNPGDRLKSGMFARVRTVMGV
RENALLVPEEALVPLGNKQYVFKVVAGEKGQVAQREEVTVGLRLPGLAEVTGAVKAGDVV
VTAGQARLGRDATPVPVRVIDLARTASSGSGAAAGAVAASAPGRAASGLTMGDAASSP
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatcacacaaaaactggtggccctcgtgggcctggtggccctcgccggtgcggcc
tattgggtgcagaaccgacccgccggcacgagtcccgtcgccggcgaggcagcggcgggt
gggccggtggccggcgcgggttctggcgcggccaagggggctcagggccgatccggcaac
gcgggcgggccggcaccggtcgaggtcggccaggtggtgttgcgccggctcgacgacgat
gtgcacgcggtcggcagcctgcgctccaaccagggcgtgatgatgcggcccgaggtggcc
ggccggatcatgaagatcggcttccaggacggccagcgggtgcgccgcggccaactgctg
atccagctcgacgacaccctgcagcaggcccagttgcagcaggcgcgggcccaggccggc
atcgccaacaccaatctgcagcgcagccaggagctggcagctgaaaagttcgtgagccag
agtgccgtcgatcaggcggccgccaacgtcgccgtggccgatgcgcaagtccggctggtc
gaggcgcagctggcgcgcatgcgcgtgcttgcaccgttcgacgcgatggccggcatccgg
ctgatcaacgtcggcgatttcgtcaaggatggcgccgacctcatcaacctcgaagacacc
agcagcatgtggctcgattaccgcctgcccgagcgggtgctgggccggctgcggcgcggc
gcggtcatcgaggccgagatggacgcctttccgggtcagcagttcaagggccaggtcgaa
gccatcgatgcccaggtcgatgccaacggccgggccctgctggtgcgcgcgcgggtcaac
aacccgggcgaccggctcaagtcgggcatgttcgcgcgggtgcgcacggtgatgggcgtg
cgcgaaaacgccttgctggtgcccgaggaggccctggtgccgctgggcaacaagcaatat
gtcttcaaggtggtggcaggtgagaagggccaggtggcgcagcgcgaggaagtgacggtg
ggcctgcgcctacccgggctggccgaagtcaccggcgcggtcaaggccggcgatgtggtc
gtcacggccggccaggcccggctggggcgcgacgcgacgccggtgccggtgcgggtgatc
gatctggcccgcacggcgtcgagcggttccggtgcggctgcaggcgcggtcgccgcgtcg
gcgccgggccgcgcggccagcgggctgacgatgggtgacgccgcctcgtcgccctga
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