Leptothrix cholodnii: Lcho_3714
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Entry
Lcho_3714 CDS
T00681
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lch
Leptothrix cholodnii
Pathway
lch01501
beta-Lactam resistance
lch01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Lcho_3714
01503 Cationic antimicrobial peptide (CAMP) resistance
Lcho_3714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lch03036
]
Lcho_3714
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_3714
01504 Antimicrobial resistance genes [BR:
lch01504
]
Lcho_3714
Chromosome and associated proteins [BR:
lch03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Lcho_3714
Transporters [BR:
lch02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Lcho_3714
Antimicrobial resistance genes [BR:
lch01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Lcho_3714
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
BSH_CusB
YknX_C
Beta-barrel_RND_2
BSH_CzcB
HH_EMRA
CzcB_C
HH_CzcB
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
ACB35968
UniProt:
B1Y5S2
LinkDB
All DBs
Position
complement(4156410..4157636)
Genome browser
AA seq
408 aa
AA seq
DB search
MAGMNRSMRVSTGWVLALSVLSAALLVACGGGTAAPGAAGPGGGGMPPPPSVGVVTVQPA
SVGLTTELPGRLEAWRTAQVRSRVAGIVQKRLFTEGSDVKAGQSLFQLDAASFQAQLDSA
LAVQAKAEANLAQAQSTLDRNQPLAAAKVISQQEWVLNQTALKQAQADLATARAAVQTAR
LNVEYAAVRAPIGGHIGRALVTEGALVGQGEATLMATIQQTDPLYVNFTQSANEVLRLRR
AIEGGSLKKLGKDGGRQAAPIRVVLDDGSLYPLPGKLLFTDLSVDATSGQVTLRAELPNP
QGLLLPGLYVKVRLEQAQADHGMVLPQQAVTRGVAGDTVLVVGADHSVSQRTVKIGSALG
NQWVVLDGLKPGEQVVVDGFQKIRPKTPVTPVPWAPPAASAAVVAASR
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtatgaatcgatcgatgcgggtttcgaccggctgggtcctggcgctgagcgtg
ctgagcgcggcgttgctggtggcgtgtggcggtggaacggcagcgcccggcgcggccggc
ccgggcggcggcggcatgccgccgccgccgagcgtgggcgtggtcacggtgcagccggcg
tcggtcggcctgaccaccgagctgcccggccggctcgaggcctggcgcaccgcgcaggtg
cggtcccgcgtggccggcatcgtgcagaagcgcctgttcaccgaaggcagcgacgtcaag
gccggccagtcgctgttccagctcgacgccgccagcttccaggcccagctcgacagcgcc
ctggccgtgcaggccaaggccgaggccaacctggcgcaggcgcagtccacgctcgaccgc
aaccagccgctggccgccgccaaggtcatcagccagcaggagtgggtgctcaaccagacc
gcgctcaagcaggcccaggccgatctggccaccgcccgcgccgcggtgcagaccgcccgc
ctgaatgtcgaatacgccgcggtgcgcgccccgatcggcggccacatcggccgcgcgctg
gtgaccgaaggcgcgctggtcggccagggcgaggccacgctgatggccaccatccagcag
accgacccgctctacgtcaacttcacgcagtcggccaacgaggtgctgcggctgcgccgc
gcgatcgagggcggctcgctcaagaagctcggcaaggacggtggtcggcaggccgcgccg
atccgcgtggtgctcgacgacggcagcctctacccgctgcccggcaagctgctgttcacc
gacctgagcgtggacgccacctccggccaggtgacgctgcgcgccgagctgcccaatccg
cagggcctgctgctgcccggcctgtacgtcaaggtgcggctggagcaggcgcaggccgat
cacggcatggtgctgccgcagcaggcggtcacccgcggcgtggccggcgacacggtgctg
gtggtcggggccgaccactcggtcagccagcgcacggtcaagatcggctcggcgctgggc
aaccagtgggtggtgctcgacggcctgaagccgggcgagcaggtggtggtcgacggcttc
cagaagatccggcccaagacgccggtgacgccggtgccgtgggcgccgccggctgcgagc
gcggccgtcgtggcggccagccgctga
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