Leptothrix cholodnii: Lcho_3743
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Entry
Lcho_3743 CDS
T00681
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lch
Leptothrix cholodnii
Pathway
lch01501
beta-Lactam resistance
lch01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Lcho_3743
01503 Cationic antimicrobial peptide (CAMP) resistance
Lcho_3743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lch03036
]
Lcho_3743
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_3743
01504 Antimicrobial resistance genes [BR:
lch01504
]
Lcho_3743
Chromosome and associated proteins [BR:
lch03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Lcho_3743
Transporters [BR:
lch02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Lcho_3743
Antimicrobial resistance genes [BR:
lch01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Lcho_3743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
Peptidase_M23
PTS_EIIA_1
RnfC_N
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
ACB35997
UniProt:
B1Y5V1
LinkDB
All DBs
Position
4200715..4201839
Genome browser
AA seq
374 aa
AA seq
DB search
MSRLVSSSSPRFLASRWARAVLLAAALSSGAQAAGIEVTTIVVQPSRSSAAVALDGSVQA
LKQATVAAQVGGNVLSLAVKAGDKVRAGQLLARIDERATAAGLAEGDAAVAQAEAALQRA
RTELDRTRELLKQGYVSQAAFDNAETQHRATQAGLQQAQAARSQAVLARGFASVTAPFDG
LVLATHLDAGDLASPGRPVLTLYAPGTMRAVVQLPASLAAQARSAQQIEIELPDGRIVSP
QRRTELPGADAVSQTVEWRLDLAPADSAGLLPGQSVRVRFAGAADRKADAPTSGSSGPAS
LSVPAGALLHRGELSAVYVAQGTQFVLRAVRSGPVQQGQVKVLAGLKAGERVAVDAIRAG
LAQARPAGSASSAP
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccttgtttcttcgtcgtcacctcgttttctggccagccgatgggcgcgggcc
gtgctgctggcggccgcgctgagttcgggcgcacaagccgccggcatcgaggtcaccacg
atcgtggtccagccctcgcgcagcagcgcggcggtggcgctcgacggcagcgtgcaggcg
ctcaagcaggcgacggttgcggcgcaggtcggcggcaatgtgttgagcctggcggtcaag
gccggagacaaggtgcgcgccggccagctgctcgcccgcatcgacgaacgtgccaccgcc
gctggcttggccgaaggcgacgccgccgtggcgcaggccgaagccgcgctgcagcgcgcc
cgcaccgaactcgaccgcactcgcgagctgctcaagcagggttacgtcagccaagccgcg
ttcgacaacgccgaaacccagcaccgcgccacccaggccggcctgcagcaggctcaggcc
gcgcgcagccaggccgtgctggcgcggggttttgcgagcgtgacggcgccgttcgatggc
ctggtgctcgccacccatctcgacgccggcgatctggccagccccggccgcccggtgctg
acgctctacgcgcccggcacgatgcgcgcggtggtgcagctgccggcgtcgctggcggcg
caggcccgcagcgcgcagcagatcgagatcgagctgcccgatggccgcatcgtcagcccg
caacgccgcaccgaactgcccggcgccgacgcggtgtcgcagacggtcgaatggcgcctc
gacctggcgccggccgacagcgccggtctgctgcccgggcagagcgtgcgggtgcggttt
gccggtgcagccgatcgcaaggccgacgcgcccacgtcaggttcttcaggtccggcgagc
ctgagcgtgccggcgggcgcgctgctgcaccgcggcgagctgagcgcggtctacgtcgca
cagggcacgcagttcgtgctgcgcgcggtgcgcagcggcccggtgcagcaaggccaggtc
aaggtgctggcggggctgaaggccggcgaacgcgtcgccgtcgatgcgatacgggccggc
ctggcccaagcccgcccggcgggcagcgccagcagcgcgccgtga
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