KEGG   Leptothrix cholodnii: Lcho_3965
Entry
Lcho_3965         CDS       T00681                                 
Name
(GenBank) efflux transporter, RND family, MFP subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
lch  Leptothrix cholodnii
Pathway
lch01501  beta-Lactam resistance
lch01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:lch00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Lcho_3965
   01503 Cationic antimicrobial peptide (CAMP) resistance
    Lcho_3965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lch03036]
    Lcho_3965
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:lch02000]
    Lcho_3965
   01504 Antimicrobial resistance genes [BR:lch01504]
    Lcho_3965
Chromosome and associated proteins [BR:lch03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    Lcho_3965
Transporters [BR:lch02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   Lcho_3965
Antimicrobial resistance genes [BR:lch01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    Lcho_3965
SSDB
Motif
Pfam: Biotin_lipoyl BSH_CusB YknX_C HH_YBHG BSH_RND BSH_CzcB Beta-barrel_RND_2 HH_EMRA BSH_YknX RND-MFP_C HH_MFP_RND GGDEF RnfC_N NQRA_N
Other DBs
NCBI-ProteinID: ACB36219
UniProt: B1Y8F3
LinkDB
Position
complement(4445308..4446396)
AA seq 362 aa
MPALLAGLLLPQALLAQADKAATRPALTVTTVTPQPAEWPQTLVANGNVAAWQEAVLGAE
IGGLVLTEVAVEVGDRVRRGQVLARLDGDSVKAELAQSRAAVAEAEATLAEARGNADRAR
SLAPSGVISAQQTAQVLTAEQTAAARLQSARARLQVDELRLRKTELTAPDDGVISARVAS
VGSVVQSGQELFRLIRQGRLEWRAEVGSADLARLQPGMAVQLSTPAGQRVAGKLRRIAPT
VDLSSRNALVYVDLSPGSDARAGMYARGEFALGRQQALTLPAAAVLLRDGFHVVMRLGAD
HRVSQTKVTVGQRLGERIAVAGLPAEAQVVATGAAFLADGDSVKVVGAVPTIVPAAVPRG
AK
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgcccgccttgctggccggcctgctgctgccgcaggcgctgctcgcgcaggccgacaag
gcggcgacgcggccggcgctgaccgtcaccaccgtcacgccgcagccggccgaatggccg
cagacgctggtcgccaacggcaacgtcgcggcctggcaggaggcggtgctgggggccgag
atcggcggcctggtgctgaccgaggtggcggtggaggtgggcgaccgcgtgcggcgtggc
caggtgctggcgcggctcgacggcgacagcgtgaaggcggagctggcgcagtcgcgcgct
gccgtggccgaagccgaggccacgctggccgaggcgcgtggcaatgccgaccgggcccgc
tcgctcgcgcccagcggcgtcatcagcgcgcagcagaccgcccaggtgctgaccgccgaa
cagaccgccgccgcccggctgcaatcggcccgtgcccggttacaggtcgacgagctgcgc
ctgcgcaagaccgaactgaccgcacccgacgacggggtgatctcggcccgcgtggccagc
gtcggcagcgtcgtgcagagcggccaggagctgttccggctgatccgccagggccgcctc
gagtggcgcgccgaggtcggttcggccgatctggcgcggttgcagccgggcatggcggtg
cagctgagcacgccggccggccagcgggtggccggcaagctgcgccgcatcgccccgacc
gtcgacctgagcagccgcaacgcgctggtctacgtcgacctctcgcccggcagcgatgcg
cgcgcgggcatgtacgcgcgcggcgagttcgcgctcgggcgccagcaggcgctcacgctg
ccggctgcggcggtgctgctgcgcgacggtttccatgtcgtgatgcggctgggcgccgac
caccgcgtcagccagaccaaggtcacggtcggccagcgcctgggtgaacgcatcgccgtc
gccggcctgccggccgaggcccaggtggtggcgaccggcgcggccttcctggccgatggc
gacagcgtcaaggtggtcggcgcggtgcccacgatcgtgccggcggccgtgccgcggggc
gcgaaatga

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