Lacticaseibacillus chiayiensis: KG086_06505
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Entry
KG086_06505 CDS
T07576
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lchi
Lacticaseibacillus chiayiensis
Pathway
lchi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lchi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KG086_06505 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lchi03400
]
KG086_06505 (nth)
Enzymes [BR:
lchi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KG086_06505 (nth)
DNA repair and recombination proteins [BR:
lchi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KG086_06505 (nth)
Prokaryotic type
KG086_06505 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
HHH_8
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
QVI35933
LinkDB
All DBs
Position
complement(1372992..1373645)
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AA seq
217 aa
AA seq
DB search
MTDAEARQLFDQIMALYPDPEPTLHAANPFEILVAVMLSAQTTDVAVNAVTPALFAAYPN
PEAMAEAPVEAIAEKISRLGLYRTKAAHLKALSHILVHSYDGQVPADAADLVKLPGVGKK
TATVVLSDAFGIPGVAVDTHVSRIVKGLGLVSPKATPVQIQKRLEDLMPKSTWIKLHRSL
IRFGREHLRARDPQVPKGSEWSFLAEHYAPLKEAAKN
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgcagaggcgaggcaattgtttgaccaaatcatggcactttatccagatccc
gaaccgacattacacgcagcgaatccgtttgaaattttggtcgcggtaatgttgtcggca
caaacgacggatgtggctgtcaatgccgtgacgccggcattatttgcagcttatccgaac
ccggaagcgatggctgaagcaccggttgaagcgattgctgaaaaaatcagccggttggga
ttatatcggacgaaagcggctcatctaaaagcgctcagtcacattttggttcattcctac
gacgggcaggttccggctgatgctgcagatttagtcaaattgcccggggttggtaagaaa
acagccaccgtggtgctaagtgatgcgttcggtatcccgggtgtggccgttgatacgcat
gttagtcggattgtcaaaggtttgggattggtttcacccaaggcaacgccagttcagatt
cagaaacgcttagaagacttaatgccaaagtccacgtggattaaattgcatcgcagctta
atccgttttggccgtgaacatctgcgagcccgtgatccacaagtgccaaaaggttccgag
tggtcatttctggcggagcattacgcgccacttaaggaggcagcgaagaattga
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