Novilysobacter ciconiae: INQ41_06400
Help
Entry
INQ41_06400 CDS
T08092
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
lcic
Novilysobacter ciconiae
Pathway
lcic01501
beta-Lactam resistance
lcic01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lcic00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
INQ41_06400
01503 Cationic antimicrobial peptide (CAMP) resistance
INQ41_06400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcic02000
]
INQ41_06400
01504 Antimicrobial resistance genes [BR:
lcic01504
]
INQ41_06400
Transporters [BR:
lcic02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
INQ41_06400
Antimicrobial resistance genes [BR:
lcic01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
INQ41_06400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
QOW20626
UniProt:
A0A7S6UHZ1
LinkDB
All DBs
Position
1393457..1396939
Genome browser
AA seq
1160 aa
AA seq
DB search
MSDLKQTAPAVPGAHPQRNFSLVEFSTRRRVTVAMVTLTFVLFGLIALGNLKVNLLPDLS
YPTLTVRTEYTGAAPTEIETLITEPVEEAVGVVKGLRKLKSVSRTGQSDVVLEFAWGTDM
DKAGLEVRDKMESLQLPLEAKPPVLLRFNPSTEPIIRVALSSKAEGDELRQLALLRQYAD
DDLKKKLEPVLGVAAVKVGGGLEDEIQVLVDQQKLAQLNLPISTVTQRLGQENINISGGR
LEEGSQRYLVRTVNQFSSVDQIRDLLVTTSTGGSDAAAEAAMQMARVAAASGSADAMAAA
ASVQSASSGNASTVAGGKPVRLKDIAEIVQGHKEREAIIRLDGREAVELAIYKEGDANTV
ATADAIHERLESIRKQVPADIDLTVIDDQSTFIRNAISDVKMDAVIGGMLAILVIFLFLR
DGWSTFVIGLSLPISIITTFFFMGQLGLSLNVMSLGGLALATGLVVDDSIVVLESIAKAR
ERGLGILQAAITGTAEVSMAVVASTLTTVAVFLPLVFVEGIAGQLFRDQALTVAIAIGIS
LAVAMTLIPMLSALRGRPSESLPEEPPHPQWQPSRTWQKPVAATRRGVGAGVGGALFGIA
WVFVRMWRGVSAVVGPVMRKASDLAMAPYARAERGYRKLLPAAMGRPVFVLGSAAAAFAL
ALLLVPMLGADLIPQLAQDRFDMTVKLPPGTPLRETDALVQSLQKKHAGTEGIHAIYGVS
GSGTRLDASPTDSGDNVGKLSIVMSNGGSDRLEASMSGALRQSMRDHPSAQVDFSRPELF
SFSMPLEIELAGPDLETIRKAGQKMAALLRANPHYTDVSSTVEQGFPEIQILFDQQRAAA
FGLTTRQIADAVVSKVRGDVATRYSFRDRKIDVLVRLKEEERGSVDDIRNLIINAGGKTV
QLGSVAEVVSTTGPSEIHRADQVRVAVVSSNLQGIDLGSAVLEVQKLVADNPLGAEVQMH
IGGQGEELGDSLRSLLFAFGLAIFLVYLVMASQFESLLHPFVILFTIPLAMVGAVLALLL
TRSPVSVVVFIGLILLVGLVTKNAIILIDKVNQLREAGVAKREALLQGAQSRLRPIVMTT
LSTLFGFLPLALAFGEGAEVRSPMAITVIGGLLVSTLLTLIVIPVVYDLLDRRPDEYYRH
RARRGEDIPPAGEAYPEPVA
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctcaagcagaccgcgccggccgtgcccggggcgcacccgcagcgcaacttc
agcctggtcgaattctcgacccggcgccgggtcacggtggcgatggtgacccttactttt
gtgctgttcggcttgatcgcgctcggcaacctgaaggtcaacctgttgccggacctgagc
tacccgacgctgacggtacgtaccgaatacacaggtgcggccccgaccgagatcgagacg
ctgatcaccgagccggtcgaagaggccgtgggcgtggtgaaaggactgcgcaagctcaag
tcggtctcgcggaccgggcagagcgacgtcgtgctcgagttcgcctggggcaccgacatg
gacaaggccgggctggaggtgcgcgacaagatggagtcgctgcagctgccgctggaggcc
aagccgcccgtgctgctgcgcttcaatccgtccaccgagccgatcatccgcgtcgccctg
tcgtccaaggccgaaggcgatgagttgcgccaactggccctgctgcgccagtacgccgac
gatgacctgaagaagaagctcgagccggtgctcggcgtggccgcggtgaaggtgggcggc
gggctggaggacgagatccaggtgctggtggaccagcagaaactggcgcagctcaacctg
ccgatctccaccgtgacccagcgcctgggccaggagaacatcaacatctccggcggccgg
ctggaggaaggttcacagcgctacctggtgcggacggtcaaccagttctccagcgtcgac
cagatccgcgatttgctggtgaccaccagcaccggaggcagcgacgcggccgccgaagcc
gcgatgcagatggcgcgcgtggccgcggcgtcgggctcggccgatgcgatggccgcggcg
gcgtcggtgcaaagcgcgtcctcgggaaatgccagcacggttgccggcggaaagccggtg
cgcttgaaggacatcgccgagatcgtccagggccacaaggagcgcgaagcgatcatccgc
ctggatggccgcgaagccgtcgagctggcgatctacaaggagggcgatgccaacaccgtg
gcgaccgccgacgcgatccacgagcggctcgaatccatccgcaagcaggtgccggccgac
atcgacctgaccgtcattgacgaccagtccaccttcatccgcaacgcgatcagcgacgtc
aagatggacgcggtgatcggcgggatgctggcgattctggtgatcttcctgttcctgcgc
gatggctggagcacgttcgtcatcggcctgtcgttgccgatctcgatcatcacgacgttc
ttcttcatgggccagctgggcctgagcctcaacgtgatgtcgctgggcgggctggcgctg
gcgacggggctcgtggtggatgactcgatcgtggtgctggagtcgattgccaaggcgcgc
gaacgcggcctggggatcctgcaggcagccattaccggcaccgccgaggtcagcatggcg
gtggtggcctcgaccctgaccacggtggcggtgttcctgccgctggtgttcgtggaaggc
atcgccgggcagctgttccgcgaccaggcgctgacggttgccattgccatcggcatctcg
cttgcggtggcgatgacgctgattccgatgctgagcgcgctgcgtggccggccgtcagaa
tcgctgcccgaggagccgccccatccgcagtggcaacccagccgcacctggcagaaaccg
gtggcggctacccgacgcggtgtgggcgccggcgtgggcggcgcgctgttcgggattgcg
tgggtgttcgtgcgcatgtggcgcggcgtgtccgccgtggtggggccggtcatgcgcaag
gccagcgatctggccatggcgccgtacgcacgtgccgagcgcggttaccggaagctgctc
cccgcggcgatgggccgcccggtgttcgtgctggggtcggccgcggccgctttcgcgctg
gccttgctgctggtgccgatgcttggcgcggacctgataccgcagttggctcaggaccgc
ttcgacatgacggtcaagctgccgccgggcacgcccttgcgggaaaccgacgcgctggtg
cagagcctgcagaagaaacacgcgggcacggaaggcatccatgcaatctacggagtcagt
ggcagcggcacgcggttggatgccagcccgaccgacagcggcgacaacgtcggcaagctc
agcatcgtgatgagcaacggaggcagcgaccggctcgaggcgtcgatgtcgggcgcgttg
cgccagagcatgcgcgaccacccgtcggcgcaggtcgatttcagccgcccggagttgttc
agtttctccatgccgctggagatcgagctggcgggaccggacctggagaccatccgcaag
gcagggcagaagatggccgcccttttgcgggccaacccgcactacaccgacgtcagctcg
accgtcgagcagggctttccggagatccagatcctgttcgaccagcagcgggcggccgcg
ttcggcctcaccacccgccagatcgcggatgcggtggtgtccaaggtgcgcggcgacgtg
gcgacgcgctacagcttccgcgatcgcaagatcgacgtgctggtgcggctcaaggaggaa
gagcgcggctcggtggatgacatccgcaacctgatcatcaacgccggcggcaagacggtg
cagctgggctcggtggccgaggtggtctccaccacgggcccgagcgagatccatcgcgcc
gaccaggtccgggtcgcggtggtgtcgtccaacctgcagggcatcgatctgggcagtgcg
gtgctggaggtgcagaagctggtcgccgacaacccgctgggcgccgaggtgcagatgcat
attggcggtcagggcgaagaactcggcgattccctgcggtcgctgctgttcgcgttcggg
ttggccattttccttgtctacctggtgatggcctcgcagttcgaatcgctgctgcatccg
ttcgtgatcctgttcaccatcccgctggcgatggtcggcgcggtgctggcgcttttgctg
acgcgatcgccggtctcggtggtggtcttcatcgggctgatcctgctggtcgggctggtg
accaagaacgcgatcatcctgatcgacaaggtcaaccagctgcgggaggcgggcgtggcc
aagcgcgaggccttgctgcagggcgcccagtcgcgcctgcggcccatcgtgatgaccacg
ctgagcacgctgttcggcttcctgccgctggcgttggcctttggcgagggcgccgaagtc
cgctcgccgatggcgatcaccgtcatcggtggactgctggtatcgaccctgctgaccctg
atcgtgatccccgtcgtctacgacctgttggaccgccggccggacgagtactaccgccat
cgcgcccggcgcggtgaggacatccctccggcgggcgaggcctacccggagccggtcgca
tga
DBGET
integrated database retrieval system
