Lichenicola cladoniae: HN018_17130
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Entry
HN018_17130 CDS
T07054
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lck
Lichenicola cladoniae
Pathway
lck03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HN018_17130 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lck03400
]
HN018_17130 (nth)
Enzymes [BR:
lck01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HN018_17130 (nth)
DNA repair and recombination proteins [BR:
lck03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HN018_17130 (nth)
Prokaryotic type
HN018_17130 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
TetR_C_30
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
QKE92750
UniProt:
A0A6M8HWP6
LinkDB
All DBs
Position
3776398..3777039
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AA seq
213 aa
AA seq
DB search
MTQREVVSFIEALALANPNASSELVFTNAYTLLVSVVLSAQATDVSVNKATVGLFADAPD
PATMVRLGEDGVARHIRTIGLWRAKAKNVVALSQVLIDRHGGEVPSDRLSLEALPGVGRK
TANVVLNVVFGESTMAVDTHILRLGNRTGLAPGATPRAVEDQLVKRIPRDMLRPSHHWLI
LHGRYVCKARAPECWHCVGRPYCHYPDKRLEPV
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaacgggaggttgtatctttcatcgaggcgctggcactcgccaacccgaatgcc
agcagcgaactggtgttcaccaacgcgtacacgttgctggtttcggtcgtcctgtctgcg
caggcgaccgacgtatcggtgaacaaggcgacggtcgggctgttcgccgatgcaccggat
ccggccaccatggtccggcttggcgaggacggcgtggcccgccatatccgcacgatcggc
ctgtggcgggcgaaggcgaagaacgtggtcgccttgtcgcaggtgctgatcgaccggcat
ggcggcgaggtgccatccgaccggctctcgcttgaggcgctgcccggggtcgggcgaaag
accgccaacgtcgtgctgaacgtcgttttcggcgaaagcacgatggcggtcgacacccat
atcctgcgactgggcaaccgcaccggactggcgccgggtgcgacgccacgcgcggtcgag
gaccagctggtcaagcgcatcccgcgcgacatgctgcgcccatcgcatcactggctgatc
ctgcacggtcgctacgtgtgcaaggcccgtgcgcccgaatgctggcactgtgtcggccgg
ccctactgccactaccccgacaagcgcctggagcccgtctga
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