Lichenicola cladoniae: HN018_17240
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Entry
HN018_17240 CDS
T07054
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lck
Lichenicola cladoniae
Pathway
lck01501
beta-Lactam resistance
lck01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HN018_17240
01503 Cationic antimicrobial peptide (CAMP) resistance
HN018_17240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lck03036
]
HN018_17240
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lck02000
]
HN018_17240
01504 Antimicrobial resistance genes [BR:
lck01504
]
HN018_17240
Chromosome and associated proteins [BR:
lck03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HN018_17240
Transporters [BR:
lck02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HN018_17240
Antimicrobial resistance genes [BR:
lck01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HN018_17240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Flagellin_C
Motif
Other DBs
NCBI-ProteinID:
QKE91546
UniProt:
A0A6M8HTE3
LinkDB
All DBs
Position
complement(3805801..3807171)
Genome browser
AA seq
456 aa
AA seq
DB search
MSPREYDDGGHHTSVNKPETDRKQGQDPDRKPGPKQEQEPPAPPPKPPRRRLALYVVLPL
ALLVGWGVYVHWRQSSDASDTLKHAQASVPDVQVASAHRTSSLTATSLPGQTAAFESADL
FARATGYVTQRMVDIGSHVKKGDLLLVIASPDLDQQLEQAQAQLGQMQAQLEQAKASLGQ
ANANTKLALVNRNRSQILAGEGWDTKQNRDTQVTNYNVSSTGVKSAQAGIGVAVANVRAQ
QASVDRLVALTGFENVKAPFDGVITQRDVDIGNLVQSDSSTGTALLHIDQQDLLRCQVYV
PQSQFTGIHAGLPAHVTIPELPGQVFKAVVSRSSVSLAQNSRSMLVEVDIDNRDGHLTPG
LFVTVAFDVTRPAPVVVVPDAALIFDASGLHVAVVGQDSKVAMRTISIARDTGTEAELRE
GLDGTEKVIVNPPTDLSEGQKVHVLPEKKEGKQASG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgcgcgaatacgacgatggcggccaccatacgtccgtgaacaagccggaaacc
gatcgcaagcagggccaggatccggaccggaagcccggtccgaagcaggagcaggagccg
cctgcgccgccacccaagccgccgcggcgtcggcttgcgctgtatgtggtgctaccgctg
gcgctgctggtcggctggggcgtgtatgtgcattggcgccagtcgagcgacgcatccgac
acactgaagcatgcccaggcctcggtgccggatgtgcaggtggccagtgcgcatcggaca
tccagcctgaccgcgacatcgcttcccgggcagaccgcggcgttcgagtccgccgacctg
ttcgcgcgtgcgaccggttacgtcacccagcgcatggtcgatatcggcagccacgtgaag
aagggcgacctgctgctcgtgatcgcgtcgccggacctggaccagcagctggaacaggcg
caggcgcaactcggccagatgcaggcccagttggagcaggcgaaggccagcctcggccag
gccaatgccaacaccaagcttgccctggtcaatcgcaaccggtcgcagatcctggcgggc
gagggctgggataccaagcagaaccgcgacacgcaggtcaccaactacaatgtcagcagc
accggcgtgaaatccgcccaggcgggcatcggcgttgcggttgccaacgtgcgggcccag
caggccagcgtggaccggctggtggcactgaccggcttcgagaacgtcaaggcgcctttc
gacggcgtgatcacccagcgggatgtggatatcggcaacctggtgcagagcgactccagc
accggcaccgcgttgctgcacatcgaccagcaggacctgctgcgttgccaggtctatgtg
ccgcaaagccaattcaccggcatccatgccggattgccggcgcacgtcacgatcccggaa
ctgccaggacaggtattcaaggcggtggtgtcgcggtcgtccgtctcgctggcgcagaac
tcccgctcgatgctggtcgaggtcgatatcgacaatcgcgatggccatctcacgcccggc
ctgttcgtgacggtggcgttcgacgtgacgcgcccggcgccggtggttgtcgttccggat
gccgcgctgattttcgacgcctcgggcctgcacgtcgcggtggtcggccaggacagcaag
gtggcgatgcgcacgatcagcatcgcccgcgacaccggcaccgaagccgaactccgcgaa
ggcctggacggcacggagaaggttatcgtcaatccgccgaccgacctctccgaaggccag
aaggttcacgtgctgccggagaagaaggaaggtaaacaggcgtccggctag
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