Lichenicola cladoniae: HN018_19005
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Entry
HN018_19005 CDS
T07054
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lck
Lichenicola cladoniae
Pathway
lck01501
beta-Lactam resistance
lck01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HN018_19005
01503 Cationic antimicrobial peptide (CAMP) resistance
HN018_19005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lck03036
]
HN018_19005
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lck02000
]
HN018_19005
01504 Antimicrobial resistance genes [BR:
lck01504
]
HN018_19005
Chromosome and associated proteins [BR:
lck03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HN018_19005
Transporters [BR:
lck02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HN018_19005
Antimicrobial resistance genes [BR:
lck01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HN018_19005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
HH_MFP_RND
YknX_C
RND-MFP_C
Beta-barrel_RND
BSH_CzcB
BSH_CusB
CzcB_C
Beta-barrel_RND_2
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
QKE91840
UniProt:
A0A6M8HU46
LinkDB
All DBs
Position
complement(4208592..4209884)
Genome browser
AA seq
430 aa
AA seq
DB search
MQRTPAPVLALAALSLATAVTITGSALAAGPPAPPPPPPVGVSQVRMAPVTSSSQYIGRI
QAIDRVALVPRVTAYLEKRLFDEGSEVKKGDLLYVLEQGPFQAEVLAQQGTLAQAQATVL
NARVNFGRQKALLSTPAGQKQAYDNAAATAQTGAGSVLTAQGNLQSAQIQLAYTEIRAPV
DGRITETSVNQGNVVSPSSGTLATIVTQDPMYVEFPAASRDVLTLQKKYGSIGGLSKATI
KIQLSDGTTYDQNASLDYVAPTVSNQTDTITLRATVANPKRGETGAGVSTRQLVDGEFVT
VTVQDPNPVEQMIIPRASVLSDQQGDYVFTLDAQHKVVRTNLKLGQSTGADTVVLSGLKQ
GQDIVVDGIQKIHDGEQVVPEAPQAVVPDPGQEAPAAHAQSNQAGAAQATKNQAAATQGS
PSPGATPGQR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcactccggcgccggttctcgcgcttgccgctctctccctagcgacggcagtg
actatcaccgggtctgcgctcgcagctgggccaccggctccgcccccacccccgccggtc
ggcgtctcgcaggtcaggatggctccggtcaccagttcttcacagtatatcggccgcatc
caggcgatcgaccgtgtcgctctggtgccgcgggtgaccgcctatctcgagaagcggctg
ttcgacgaggggtccgaggtcaagaagggcgacctactctatgtgctcgagcaggggccg
tttcaggcagaggtgctggcgcagcaaggcacgctggcccaggcgcaggcgaccgtcctg
aacgcgcgcgtcaatttcgggcggcagaaggcgctgctgagcactcctgcaggccagaag
caggcctatgacaatgcagcggcgacggcgcagaccggtgccggcagtgtactcaccgcg
cagggcaacctgcagagcgcgcagatccagcttgcctataccgagattcgtgcgccggtg
gatggtcgtatcaccgagacctcggtcaaccagggcaacgtggtcagccccagcagcggc
acgctggcgacgatcgtgacccaggacccgatgtacgtcgaatttccggcagcaagccgc
gacgtgctgacccttcagaagaagtacggctcgatcggcggtctgtccaaggcgacgatc
aagatccagctgagcgacggcacgacctacgatcagaacgccagcctcgactacgtggca
cccaccgtgtcgaaccagaccgataccatcacgctgagggcgacggtcgccaatcccaag
cgcggcgaaaccggcgccggcgtcagcacccgtcaactggtcgatggcgagttcgtcacc
gtgacggtgcaggatccgaacccggtcgagcagatgatcatcccgcgcgcctcggtgctg
tccgaccagcagggagactacgtgttcaccctggatgcgcagcataaggtcgtgcgtacg
aacctgaagctcggtcaatccaccggagccgatacggtcgtgctgtcgggcctgaagcag
ggccaggacatcgtcgtggacggcatccagaagatccatgatggcgagcaggttgttccc
gaggcgccgcaggcggtcgtacccgatccgggccaggaagcaccggcggcccatgcgcag
tccaaccaggccggcgcagctcaggcaacgaagaaccaggcggccgccactcagggtagc
ccttcgcccggcgccacgcccggccagcgctaa
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