Lichenicola cladoniae: HN018_20340
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Entry
HN018_20340 CDS
T07054
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
lck
Lichenicola cladoniae
Pathway
lck01501
beta-Lactam resistance
lck01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HN018_20340
01503 Cationic antimicrobial peptide (CAMP) resistance
HN018_20340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lck03036
]
HN018_20340
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lck02000
]
HN018_20340
01504 Antimicrobial resistance genes [BR:
lck01504
]
HN018_20340
Chromosome and associated proteins [BR:
lck03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HN018_20340
Transporters [BR:
lck02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HN018_20340
Antimicrobial resistance genes [BR:
lck01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HN018_20340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
BSH_CzcB
YknX_C
Beta-barrel_RND_2
HH_YBHG
BSH_CusB
HH_AAEA_pHBA
HH_EMRA
DUF3606
Motif
Other DBs
NCBI-ProteinID:
QKE92072
UniProt:
A0A6M8HUN7
LinkDB
All DBs
Position
complement(4476583..4477788)
Genome browser
AA seq
401 aa
AA seq
DB search
MTVTRSAACCLALLVAVPMAGCGKAEKPKQAKQVVTVDVVTLHTAPVTLTTELPGRLAAH
RIAEVRPQVNGLVLKRMFTEGDTVKAGQQLYQIDPKPYQASLASAKATLAGAKATVVSAQ
MTVDRYKPLARAFAVSKQDLDNAVATLGQDQANIGSGEASVQTASINLAYTRMYAPITGR
TGRSSVTEGALVTQNQTDSLVTITELDPIYVDVTQDSTTLLRLKRELAAGQLKRAGDGAA
EVSLIFDDGSRYEHPGRLLFSEVSVDPTTGSVTLRALFPNAEGLLLPGMFVREQIQEGVR
QNGLLVPQRGITHNQHGDAIAMVVGQDGKVAQRSVTTDRAIGNDWLVSKGLADGDHVIVD
GLQNIHPGDAVQTRQVTVDGSDLKPVQPEPGAPAKTPPQAH
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcacccgtagtgccgcatgctgccttgctcttctggtggcggtgccgatggca
ggatgcggcaaggccgagaagcccaagcaggccaagcaggtggtcacggtcgatgtcgtc
accctgcacaccgcgccggtgacgctgaccaccgagcttcccggccgactggcggcgcac
cggatcgcggaggtgcggccgcaggtgaatggactggtgctgaagcgcatgttcaccgaa
ggcgacacggtcaaagccggccagcagctctaccagatcgatcccaagccctatcaggcg
agcctcgcgagtgctaaggcgaccttggccggcgccaaggcgaccgtggtgtccgcgcag
atgaccgtcgatcggtataagccgctggcccgggccttcgccgtcagcaagcaagacctc
gacaacgcggtggcgacgctcggacaggaccaggccaatatcggtagcggcgaggcgtcg
gtccagaccgcgtccatcaacctcgcctacacccgcatgtatgcgcccatcaccgggcgt
accgggcggtcgagcgtaaccgagggggcgctcgtcacgcagaaccagacggactcgctg
gtcaccatcaccgagctcgatccgatctatgtcgatgtgacccaggacagcacgacgttg
ctgcggctgaaacgcgaactggcggcgggccagttgaagcgtgccggggacggcgccgcc
gaggtcagcctgatcttcgatgacggcagccgctacgaacatcctggccggctgctgttc
tccgaggtgagcgtcgacccgaccaccggctccgtgacgctgcgggccttgttccccaat
gccgaggggctgctgctgccgggcatgttcgtgcgcgagcagatccaggagggcgttcgc
cagaacgggctgctggtcccgcaacgcggtatcacccacaaccagcatggcgatgcgatc
gcgatggtcgtcggccaggacgggaaggtggcgcagcgcagcgtcaccaccgaccgcgcg
atcggcaacgactggctcgtgtcgaaaggcctcgccgacggcgaccatgtgatcgtcgac
gggctgcagaacattcatcccggcgatgccgtgcagacgcgccaggtgacggtcgacggc
agcgacctgaagccggtgcagcccgaacctggcgcgccggccaagactccgccgcaagcc
cactag
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