Latimeria chalumnae (coelacanth): 102346248
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Entry
102346248 CDS
T02913
Name
(RefSeq) SLA class II histocompatibility antigen, DQ haplotype C beta chain-like
KO
K06752
MHC class II antigen
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04145
Phagosome
lcm04514
Cell adhesion molecules
lcm04672
Intestinal immune network for IgA production
lcm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102346248
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102346248
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
102346248
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102346248
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcm04147
]
102346248
Exosome [BR:
lcm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102346248
Exosomal proteins of epithelial cells
102346248
Exosomal proteins of breast milk
102346248
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
Ig_3
Ig_2
C2-set_3
C2-set_2
ig
Cna_B
I-set
T4SS_pilin
DUF1056
Motif
Other DBs
NCBI-GeneID:
102346248
NCBI-ProteinID:
XP_006010590
LinkDB
All DBs
Position
Un
AA seq
276 aa
AA seq
DB search
MSEEVTILQKLLLTGLIVSLAVLYIPNGAQCESGVSYVYQFTWECYFTNGTQDVQFVIRD
IYDGQEQFNLDSRIGHFIGFTEYGRKQAKYFNGQKDYVAQWMTEDDRWCRNNYLWMEDWA
IERKVKPQVKITPTKGMSSSHPNMLVCYVTGFFPSKIAVTWLRNGKEVNSHVTSSELLQD
GDWTYQIHVFLEMTLKSGDVYTCRVEHSSLPDPLELTWEPGMSESERSKLLTGIGGLVLG
VIFVVVGLIVYLRNKKGAPTIQVSQTQGLMHHECAT
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggaggttacaattttacaaaagcttttgctaactggtttaatagtttccctt
gctgtcctgtacattcctaacggtgcacagtgtgaatctggggtttcctatgtgtatcag
tttacctgggaatgttacttcacaaacggcacccaagatgtacaatttgttataagggat
atctatgacggacaagaacaatttaacctggacagccggatcgggcatttcatcgggttc
acagagtacgggagaaaacaggcgaaatactttaacggtcagaaagactatgtggctcag
tggatgaccgaggatgaccgctggtgcagaaacaactacctgtggatggaggactgggcg
atagagagaaaagttaaaccacaggtaaaaattactcccactaaagggatgagttccagc
caccccaacatgctggtctgctacgtcactggattctttccatcgaagattgcagtcaca
tggctcagaaatgggaaggaggtcaacagtcatgtgacctccagtgagctgctgcaggat
ggagactggacctatcagattcatgtgtttctggagatgacactgaaaagcggagacgtt
tacacctgtcgtgtggaacacagcagccttccagaccctttagagctgacttgggaacct
ggtatgtccgagtcggagcgaagcaaactccttactggaatcggaggattagtactggga
gtgatctttgtggtggtcggactcatcgtgtacctgagaaacaagaaaggagcgccgacc
atccaagtttcccaaacacaaggtctcatgcatcacgaatgtgccacataa
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