KEGG   Latimeria chalumnae (coelacanth): 102347224
Entry
102347224         CDS       T02913                                 
Symbol
IRF5
Name
(RefSeq) interferon regulatory factor 5
  KO
K09446  interferon regulatory factor 5
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04620  Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    102347224 (IRF5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lcm03000]
    102347224 (IRF5)
Transcription factors [BR:lcm03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    102347224 (IRF5)
SSDB
Motif
Pfam: IRF-3 IRF
Other DBs
NCBI-GeneID: 102347224
NCBI-ProteinID: XP_006010437
Ensembl: ENSLACG00000005750
UniProt: M3XLM9
LinkDB
Position
Un
AA seq 503 aa
MSSHPRRIRLKPWLLAQVESGHYPGLQWVDKERKLFQIPWRHATRHMPSHEDENTIFKAW
AKETGKFQEGLDEPDPAKWKANMRCALNKSREFKLWYDGTKETPMQPFKVYEVCDSQIEE
PFACDENHCCPEDRDEEELPIIMPRLTIADPTPVPNPGSLPSYTWMKQEVPFSNHCTNRP
FDQNDMVSSNFVAPPSSGDIAHQNPGAPGPVGNAPIPLPPQNIPPQPMEPLIPSVFSPHM
LPLTDLEIKFTYRGKQVGSLTVSNPHGCRLYYSNLEPTPDQVELFGPVTLEQVRFPSTDE
LQNEKQRFYTNQLLDVMDRGLILEIQGQDIYAIRLCQCKVFWSGPCAEGQGGPNPIEREK
KIKLFSLENFLNELILSQRGQTATPPSFEIFFCFGEEWPDRKPKEKKLITVQVIPVAARL
LSEIFSGELAWSADSIRLQISNPDLKDKMVEQFKELHLIWQAQQVELQAQQVAAAVQPQP
PLEQQQQQHAPQGHWHLSPGNMQ
NT seq 1512 nt   +upstreamnt  +downstreamnt
atgagctcgcacccgcggcgcatccgactgaagccctggctgctggcccaagtggagagt
ggccactaccccggcctgcagtgggtggacaaggaaaggaagctcttccagataccatgg
cggcatgccacccggcacatgccctcccacgaggatgaaaacaccatatttaaggcctgg
gccaaagagacgggaaaattccaggaggggctggacgaacccgaccccgccaagtggaag
gccaacatgcgctgtgccctgaataagagccgggagttcaaactgtggtatgatggtacc
aaggagacgcccatgcagccattcaaagtgtatgaggtgtgcgactcccagatcgaagag
ccctttgcctgtgatgaaaatcattgctgtccagaggacagggacgaggaggagctccca
ataattatgccaagactgacgatcgctgacccaaccccagttcccaaccccggaagtctc
ccttcctacacttggatgaagcaggaagtgcccttctcaaatcactgcaccaacagacct
tttgatcagaacgacatggtcagctcaaactttgtggccccgccttcctcgggggacatc
gctcatcagaaccctggggccccgggccccgtgggaaacgctcccatccctcttcctcca
cagaacattccacctcagccgatggagccattgattccgagcgttttcagccctcacatg
ctgccgttgacggatttggagattaaattcacataccgggggaagcaagtgggctcgctg
actgtcagtaacccccacggctgccggctctattacagtaacctggagccaaccccagac
caggtggagctgttcggaccggtgaccctggaacaggtccgtttccccagtactgatgag
ctccagaatgagaaacagcggttctacaccaatcagctgctggacgtgatggacaggggg
ctgatcctggagattcagggacaggacatctatgctattcggctctgtcagtgcaaagtg
ttctggtcggggccctgcgcggagggtcagggggggcctaaccccatcgagagggaaaag
aaaattaaactcttcagcctggagaacttcttgaatgagctgatcctgtcccagagggga
caaaccgccacaccgccttcttttgagatctttttctgctttggagaggagtggccagac
aggaagcccaaagagaagaagctcataacggttcaggtgatccccgtggcggcgaggctt
ctgtccgagatcttctccggcgagctggcctggtcggccgacagcatccgcctacagatc
tccaacccagacctgaaggacaagatggtggagcagttcaaggagctgcacctgatctgg
caggcgcagcaggtggagctgcaggcgcagcaggtggcagcagcagtgcagcctcagcca
cctctggaacagcagcagcagcagcacgcgccccagggacactggcacctgtcgccgggt
aacatgcagtaa

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