KEGG   Latimeria chalumnae (coelacanth): 102347225
Entry
102347225         CDS       T02913                                 
Name
(RefSeq) DLA class II histocompatibility antigen, DR-1 beta chain-like
  KO
K06752  MHC class II antigen
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04145  Phagosome
lcm04514  Cell adhesion molecules
lcm04672  Intestinal immune network for IgA production
lcm05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    102347225
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102347225
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    102347225
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102347225
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcm04147]
    102347225
Exosome [BR:lcm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102347225
  Exosomal proteins of epithelial cells
   102347225
  Exosomal proteins of breast milk
   102347225
SSDB
Motif
Pfam: MHC_II_beta C1-set Ig_2 Ig_3 C2-set_3 Marek_A Cna_B C2-set_2 ig I-set DUF1056
Other DBs
NCBI-GeneID: 102347225
NCBI-ProteinID: XP_006010592
LinkDB
Position
Un
AA seq 303 aa
MRRMVPIATPMSPRASPKAQTTVPVTSGVDGGSSGSRKENHKNYLTVLLTLLSFPGGSHC
KLGSYVTEISTECYYTNGTEQVRFFDRYIYNKKEYLYFDSKVGLFAGTTELGRQYAERLN
KDKGILDNARAAVDRFCKPNYFAVEKFVLERKVKPTAKVTPTKVMGMHPGMIVCHVTGFY
PSKIKVKWLRNGEEVTSDVTSTELLQNGDWTYQVHVFLELTPKSGDTYTCRVEHNSLYGP
LEIRWEPGMSELERSKVLTGIGGLVLGVIFVVVGLIVYLRNKKGAPTIPVTQSQGLMHHE
YPS
NT seq 912 nt   +upstreamnt  +downstreamnt
atgagaagaatggttcctatagcaactccgatgagtcccagagcaagtccgaaagcacag
accaccgtcccagtgacttcaggtgtggacggaggctcatcaggttctaggaaagagaac
cacaaaaattatctaacagttctattaacccttctcagttttcctggaggctcacactgt
aaacttggatcctacgtgacagagataagcactgaatgttactacacaaacggcactgag
caggtgcgctttttcgatcggtacatttacaacaaaaaggaatacctttacttcgacagc
aaggtggggctgttcgccgggaccacggagctcggcaggcagtacgcggagagattgaac
aaggataaaggcatcctggataacgcacgggccgctgtagaccgattctgtaaacccaac
tactttgcggtggagaagttcgtgctggaaagaaaagttaaaccaactgcaaaagttact
ccgaccaaagtgatggggatgcaccccggcatgatcgtctgccatgtcaccgggttctat
ccatcgaagatcaaagtgaagtggctcagaaatggggaagaggtcaccagtgatgttacc
tccactgagcttctgcaaaatggagactggacctatcaggtccacgtatttctggagctg
accccgaaaagtggagacacttacacctgtcgagtggaacacaacagcctttatggtccc
ttggaaataagatgggaacctggtatgtccgagctggagcgaagcaaagtccttactgga
atcggaggattagtactgggagtgatctttgtggtcgtcggactcatcgtgtacctgaga
aacaagaaaggtgctcccaccatcccagtgacccaatcgcaaggccttatgcatcatgaa
taccccagctaa

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