Latimeria chalumnae (coelacanth): 102347725
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Entry
102347725 CDS
T02913
Symbol
EFTUD2
Name
(RefSeq) elongation factor Tu GTP binding domain containing 2
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102347725 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcm03041
]
102347725 (EFTUD2)
Spliceosome [BR:
lcm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
102347725 (EFTUD2)
Complex C
U5 SnRNP specific factors
102347725 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
102347725
NCBI-ProteinID:
XP_006000383
Ensembl:
ENSLACG00000012918
UniProt:
H3AYF8
LinkDB
All DBs
Position
Un
AA seq
971 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDLDREDRDADEVDDDDDDDDEMGDHDDDHTGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQELPTTIYEMEFLAD
LMDSSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVGI
KSTPVTLVLPDSRGKSFLFNIMDTPGHVNFSDEVTSGIRISDGIVLFIDAAEGVMLNTER
LIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLLSMYSTDENLVVS
PLLGNVCFASSQYCICFTLGSFAKIYADTYGDINYMEFAKRLWGDIYFNPKTRKFTKKAP
TSNSQRSFVEFVLEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVCK
KFFGDFTGFVDMCVQHVPSPQTGAKTKIEHTYTGGLDSDLGEAMSECDPDGPLMCHTTKM
YSTEDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEV
SRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVVLGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSVF
HHWQIVPGDPLDKSIIIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPI
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggatacagacctgtatgatgagtttggtaattacattggtccagaattagactctgat
gatgatgatcttgatagggaagacagagatgcagacgaggttgatgacgatgatgatgac
gatgatgagatgggagatcatgatgatgatcacactgggatggaagtggtgttgcatgaa
gataaaaagtattatcctacagcagaagaagtgtatggacctgaggtagagacgattgta
caggaagaggatactcaaccacttacagagcccattattaaacctgtgaagacaaagaaa
ttcacactgatggagcaggaacttcccactactatatatgaaatggagtttctggcagac
ctaatggacagttcagagctaattaggaatgtgacactttgtggacacctccatcatggc
aaaacttgttttgttgattgcctcattgaacagactcacccagagatcagaaagcgttat
gaccaagatctttgttacactgacattctgtttacagagcaggagagaggagttggaata
aagagcaccccagtaacactggtcctgcctgactctcggggcaaatcattcctctttaac
atcatggataccccaggtcatgtgaacttttctgatgaggttacttcagggattagaatt
tctgatgggattgttctcttcattgatgcagcagagggggtgatgttaaatacagagcgc
ttgattaaacatgcagtccaagagaggcttgcagtcactgtgtgcatcaacaagatagac
cggctgatcctagagctaaaactacctcccacagatgcctattacaaactccgacacatt
gttgatgaagtcaatgggctactcagcatgtattcgactgatgagaatctagttgtatcc
cctctgcttggtaacgtttgctttgcaagttcccagtattgtatctgtttcaccctgggc
tcatttgcaaagatctatgcagatacatatggagatattaactatatggaatttgctaaa
cggctttggggagacatttatttcaaccctaaaacgcggaagttcactaagaaagccccc
acaagtaactctcagagaagttttgttgaatttgtgctggagccactctacaaaatcttg
gctcaggtggtgggggatgtagatacaagccttcccagaactcttgatgaacttggcatc
catctgactaaggaggagttaaaactgaacattagacctttgcttagacttgtctgcaag
aagttctttggagatttcacaggttttgttgacatgtgtgtacagcatgtgccctccccg
cagacaggagcaaagactaaaattgaacatacttacacaggaggtttggactcagacctg
ggagaggccatgagtgaatgtgaccctgatggtcctttgatgtgccacacaaccaagatg
tatagcacggaggatggggtccaattccatgcctttgggagagtattgagtggtaccata
catgcagggcagcctgtgaaggtgctgggagaaaactacactctggaggatgaggaggat
tcccagatatgcactgttgggagactctggatctctgtagcaaggtatcacattgaagtg
agtagagtcccagcaggcaattgggttctaatagaaggagtggatcaacccattgtaaag
actgctaccattactgagccaagagggaatgaggaggcccagatattcaggccattaaaa
ttcaacactgcctctgtaattaaaattgctgttgaaccggttaatccgtcggagcttcca
aaaatgctagacggtttgaggaaagtgaataagagctacccgtctctgaccaccaaggta
gaggagtctggggagcatgtggtcctgggtactggggaactgtaccttgattgtgtcatg
catgatctcaggaaaatgtactcagaaatcgatatcaaggttgctgacccagttgtaaca
ttctgtgaaactgtggtggaaacgtcttctctgaaatgttttgctgaaacacctaacaaa
aagaacaagatcacaatgattgcagagcccttagagaaaggactggctgaagacattgaa
aatgaagttgtgcaaatcacgtggaacaggaagaagctgggtgaatttttccagaccaag
tatgactgggatttgctggctgcccgttcaatctgggcatttgggccagatgctacaggc
cccaacattctggtggatgataccctcccatctgaggtggataaagcattactggggtca
gtaaaagatagcattgtccaaggtttccagtggggcacaagggaaggcccactgtgtgat
gaaccaattcgaaacgtgaagtttaaaattctagatgctgttatcgctcaggagccatta
cacagaggaggtggacagatcatcccaactgctaggagagttgtttattcagcttttttg
atggccacccctcgtttgatggaaccctattactttgttgaagtccaggcacctgcggac
tgtgtgtctgcagtgtacacagtgctggctcgcagaagaggtcatgtgactcaggatgct
ccaatcccaggttccccgctgtacacaattaaagccttcatccccgcgatagactccttc
gggtttgagacagatctgaggacacacacacagggccaggctttctgtctttctgtcttc
caccattggcagattgtgcctggtgaccccttagacaagagcataatcatccgaccttta
gagccacaacctgcgcctcacctggccagagagtttatgatcaaaacccgacgcagaaag
ggtctgagtgaagacgtcagtatcagcaaattctttgacgatcctatgttgttggagctg
gccaagcaggatgtggtattgaactaccccatataa
DBGET
integrated database retrieval system
