Latimeria chalumnae (coelacanth): 102351546
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Entry
102351546 CDS
T02913
Name
(RefSeq) DLA class II histocompatibility antigen, DR-1 beta chain-like
KO
K06752
MHC class II antigen
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04145
Phagosome
lcm04514
Cell adhesion molecules
lcm04672
Intestinal immune network for IgA production
lcm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102351546
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102351546
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
102351546
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102351546
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcm04147
]
102351546
Exosome [BR:
lcm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102351546
Exosomal proteins of epithelial cells
102351546
Exosomal proteins of breast milk
102351546
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
Ig_2
Ig_3
C2-set_3
Marek_A
Cna_B
ig
I-set
DUF1056
T4SS_pilin
Gram_pos_anchor
OCRE
Syndecan
Motif
Other DBs
NCBI-GeneID:
102351546
NCBI-ProteinID:
XP_014353022
Ensembl:
ENSLACG00000002063
LinkDB
All DBs
Position
Un
AA seq
257 aa
AA seq
DB search
MCFQKELGLTRGVSPPFLFSLGSYVEQINSECYYTNGTEQVRFFQRYIYNKHEQVYFDSQ
AGLYIGRKQAAGWNKDKTNLDNVRAAVDRFCKPNYFVVENFVLERKVKPTAKVTPTKVMG
THPGMIICHVTGFFPSKIKVKWFRNGEEVTSDVTSTELLQNGDWTYQVHVFLELTLKSGD
RYTCRVEHNSLDGPLEISWEPGMSESERSKLLTGIGGLVLGVIFVVVGLIVYLRKKKGNN
SPKCFALLEFNHKDLHT
NT seq
770 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttccaaaaagagctgggtttgactcggggggtttcgcccccttttctcttctct
ctaggatcctacgtggaacagataaacagcgaatgttactacacaaacggcaccgagcag
gtgcgcttttttcagaggtacatttacaacaaacacgagcaggtttatttcgacagtcag
gcggggctgtacatcggcaggaagcaggcggccggctggaacaaggataaaaccaacctg
gataacgtacgggccgctgttgacagattctgtaaacccaactactttgtggtggagaac
ttcgtgctggaaagaaaagttaaaccaactgcaaaagttactccgaccaaagtgatgggg
acacaccccggcatgatcatctgccacgtcaccgggttctttccatcgaagatcaaagtg
aagtggttcagaaatggggaggaggtcaccagtgatgttacctccactgagcttctgcaa
aatggagactggacctatcaggtccacgtgtttctggagctgaccctgaaaagcggagac
agatacacctgtcgagtggaacacaacagccttgatggtcccttggaaataagctgggaa
cctggtatgtccgagtcggagcgaagcaaactccttactggaatcggaggattggtgctg
ggagtgatctttgtggtggtcggactcattgtgtacctgagaaagaagaaaggtaacaat
tccccaaaatgttttgctttactagagtttaaccacaaagatttacatac
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