Latimeria chalumnae (coelacanth): 102352106
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Entry
102352106 CDS
T02913
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type 6-like
KO
K05697
tyrosine-protein phosphatase non-receptor type 6 [EC:
3.1.3.48
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04148
Efferocytosis
lcm04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102352106
09144 Cellular community - eukaryotes
04520 Adherens junction
102352106
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcm01009
]
102352106
Enzymes [BR:
lcm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
102352106
Protein phosphatases and associated proteins [BR:
lcm01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Non-receptor PTPs
102352106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2
Y_phosphatase
SH2_1
SH2_2
DUF2959
TcdB_toxin_midN
Motif
Other DBs
NCBI-GeneID:
102352106
NCBI-ProteinID:
XP_014339473
Ensembl:
ENSLACG00000002472
LinkDB
All DBs
Position
Un
AA seq
326 aa
AA seq
DB search
MASRGWFHRDISGIDAETLLKNRGVHGSFLARPSRKNQGDFSLSVRVGNMVTHIRIQNTG
DYYDLYGGEKFATLSELVEYYTTQHGNLQDKDGTIIELKYPLNCSDPTSERWYHGHLSGA
NAETMLSEKGAPGSFLVRESMSKPGDFVLSVLTNEFRDVGGEKKPRVTHVKVMCEDGRYT
IGGSEKFDTLTDLVEQYKKTGIEELSGTWVYLKQPYYATRINAADIENRVKELTKTAEAA
KAGFWEEFDSLQKQESKLLYSRSEGQRPENKSKNRYKNILPFDHTRVSLQTIDDSVVGSD
YINANYIKVREEIVQQLTLPPHYNAA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgcgggggtggtttcaccgagatatcagtgggatcgatgctgagacgctcctg
aaaaaccgtggggtccatggcagcttcctggcacgtcccagtcgcaagaaccagggggat
ttctcgctctctgtcagggtgggcaacatggtgacacacatccggattcagaacacgggg
gattactacgacttgtacggaggggagaagtttgctacactctctgagcttgtggagtat
tacaccacccagcatggaaatctccaggacaaggatggcaccatcatcgaactcaagtac
ccgctgaactgctccgaccccacctctgagcggtggtaccatggacacctgtcgggcgcc
aatgctgagacaatgctgtcagagaagggagcaccagggagcttcttggtgcgggagagc
atgagcaagccaggagactttgtgctctcagtcctgacgaatgagttcagggatgttggt
ggagaaaagaagcccagggtcacccacgtcaaggtcatgtgtgaggatggaaggtataca
attggagggtcagaaaagtttgacactctcacagaccttgtggaacagtataagaagaca
gggattgaggaactgtccgggacctgggtttacctaaaacagccttactatgctacgcga
atcaacgctgcagacatcgaaaacagagtcaaggaactcaccaagacagcagaagcagcg
aaggcgggattctgggaggagtttgactctcttcagaagcaggaatcgaaactcctgtac
agtcgctctgagggacagagaccagagaacaagagtaaaaaccgttacaagaacatcctg
ccctttgaccacacacgagtgagtctccaaaccattgacgactctgtagtgggatcagat
tacatcaacgccaattacattaaggtaagagaagagattgtgcagcaacttacactgccc
cctcattataacgctgct
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