Latimeria chalumnae (coelacanth): 102352370
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Entry
102352370 CDS
T02913
Symbol
HMGCS1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm00280
Valine, leucine and isoleucine degradation
lcm00650
Butanoate metabolism
lcm00900
Terpenoid backbone biosynthesis
lcm01100
Metabolic pathways
lcm03320
PPAR signaling pathway
Module
lcm_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
102352370 (HMGCS1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
102352370 (HMGCS1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
102352370 (HMGCS1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
102352370 (HMGCS1)
Enzymes [BR:
lcm01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
102352370 (HMGCS1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
102352370
NCBI-ProteinID:
XP_014353414
Ensembl:
ENSLACG00000006901
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All DBs
Position
Un
AA seq
520 aa
AA seq
DB search
MPGSLPVNVEAGWPKDVGIVALEIYFPSQYVDQAELEKFDGVDAGKYTIGLGQAEMGFCS
DREDINSLCLTVVQRLMERNSISYDCIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDV
EGIDTTNACYGGTAALFNAVNWVESSSWDGRYALVVAGDIAVYATGNARPTGGAGAVAML
VGPNAPLAFERGLRGTHIQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCYTVYCNKI
QSRWQKERNDNHFTLADFGYMIFHSPYCKLVQKSLARLLLNDFLRDPSPNTENGTYSGLE
AFRDVKLEDTYFDRDVEKAFMKASSELFNQKTKASLIVSNQNGNMYTPSVYGCLASVLAQ
YSPQQLAGQRIGVFSYGSGFAATLYSIKITQDAIPGSSLDKLTASLSDLKIRLNSRKRVA
PEVFAENMKLRETTHHLANYIPQGSVDDLFPGTWYLIRVDEKHRRQYARRPLIEDGPLEA
GVEVIHAKSAVESIPSPAKKVPRIPATAEPESIVISNGDH
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcccggatctctccccgtaaatgtcgaagccggctggcccaaagatgtgggaattgtt
gccctggagatctatttcccttcccagtatgtggaccaggcggagctggagaagtttgac
ggggtggatgctggcaagtacaccatcggactgggccaggccgagatgggcttctgctct
gacagggaggacatcaactccctctgcctgacggtcgtccaacggctgatggagcggaat
agcatttcttacgattgtattggcaggttagaggtcggaactgaaaccatcattgacaag
tccaagtccgtcaaaactgtcctcatgcagttgtttgaagagtctgggaacacagatgtg
gaagggattgacaccacaaatgcatgctatggaggcacagccgcactttttaatgctgtc
aactgggtcgagtccagttcctgggatggacggtatgctctggttgttgctggagatatt
gctgtttatgctacaggaaatgctagaccaacaggtggagctggtgctgttgccatgttg
gttggccctaatgccccacttgcttttgaaagaggtcttcggggtacacatatacagcat
gcatatgacttttacaaacctgatatggtatctgaatatcctgtggttgatggaaaattg
tccattcagtgttacctcagtgcattagatcgctgctatactgtttattgcaataaaatc
cagtctcggtggcagaaggagagaaatgacaaccattttacacttgctgactttggttat
atgatcttccattctccgtactgcaagcttgtacaaaaatcactggctcgtctgctgctg
aatgactttcttcgcgaccctagccccaacactgagaatggtacatacagtggcctggag
gccttcagggatgttaaactggaagatacttattttgacagagatgtggaaaaggccttc
atgaaggctagttctgagctatttaaccagaaaactaaagcttcactaattgtatccaat
cagaatggcaatatgtacaccccttctgtctatggttgcctcgcttctgtcttagcacag
tattctcctcagcagctggctgggcaaagaattggtgttttctcttatggatctgggttc
gcagctacattgtattccataaaaataacacaggatgctattcctggctcttcgctggat
aaactcactgctagtctatctgatcttaagataagattaaactctagaaagcgtgttgcc
cctgaggtttttgctgagaacatgaagcttagagaaaccactcatcacttagctaactac
attccacaaggttctgtggatgacttgtttcctggaacatggtacctaatccgagtggat
gagaaacaccgcaggcagtatgctagacgtcctttgatagaagatggacccctggaagca
ggtgttgaagtaatccatgctaagtctgctgttgagtccataccaagccctgccaagaaa
gtgccaagaattcctgcaacagcagaacctgaatccattgtcatcagcaatggggatcac
tga
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