KEGG   Latimeria chalumnae (coelacanth): 102353104
Entry
102353104         CDS       T02913                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DP alpha 1 chain-like
  KO
K06752  MHC class II antigen
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04145  Phagosome
lcm04514  Cell adhesion molecules
lcm04672  Intestinal immune network for IgA production
lcm05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    102353104
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102353104
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    102353104
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102353104
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcm04147]
    102353104
Exosome [BR:lcm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102353104
  Exosomal proteins of epithelial cells
   102353104
  Exosomal proteins of breast milk
   102353104
SSDB
Motif
Pfam: MHC_II_alpha C1-set Ig_3
Other DBs
NCBI-GeneID: 102353104
NCBI-ProteinID: XP_006014630
LinkDB
Position
Un
AA seq 148 aa
MCSLASLLLLSLLQGALAFESEHALFQTGFCQTGHPNGDFNVMLDNEEAFSVDLEKKEVV
WRLPQFKDLAQVQAARELENMQVCKSNLGVLIKAANESLTDNDPPDVRVYPEDQVEFGKS
NILICFMDNFYPPVLNVSWYRNGELVSE
NT seq 445 nt   +upstreamnt  +downstreamnt
atgtgtagtttagcttccctgctactgctgtctttgctacaaggagcacttgcttttgaa
agcgaacacgcactgttccagacaggtttctgtcagaccggccatcctaacggagacttt
aatgtcatgttggataatgaggaggcgttttctgtggatctggagaagaaagaggtggtg
tggagactcccgcagtttaaggacctggcacaagttcaagcagcaagagagctagaaaac
atgcaagtctgtaaaagtaatctcggtgttctaataaaagctgccaacgaaagcctgaca
gataacgacccccctgatgtccgagtgtatcctgaggaccaggtggagtttggaaaatcc
aacattttaatctgtttcatggataatttttaccctccagtcctcaacgtcagctggtac
aggaatggggaacttgtgtctgaag

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