Latimeria chalumnae (coelacanth): 102355559
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Entry
102355559 CDS
T02913
Symbol
LTBP1
Name
(RefSeq) latent transforming growth factor beta binding protein 1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
102355559 (LTBP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcm04990
]
102355559 (LTBP1)
Domain-containing proteins not elsewhere classified [BR:
lcm04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
102355559 (LTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
EGF
TB
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
EGF_MSP1_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
102355559
NCBI-ProteinID:
XP_014342033
LinkDB
All DBs
Position
Un
AA seq
1703 aa
AA seq
DB search
MELFWGRWSVLLCVGISLFPAIASSDKGRFRRITYVLHPGQVAAESQQMSSVSRVGAAGQ
RQPPSFQVQLNGYTSQIRTRRMGSSSPSVQLRQESQFAPRPQLRQPHGVQLQHNGGGSPS
PSPSMQLRQPHSVQLQHISSNPSVQLRQQLPNARKIQLPQKQQLLLHGVNVCGGQCCHGW
SKAPGSQRCTKPNCVPQCQNGGMCLRPHFCVCKPGTKGKACEETTVQDTSSTSVNGGQDT
VVPHRPIPHQASQQIVAPNGQVPLKTGPMAQMTFTLKQKPPVMVSQQLQSQLIHLPSQPL
TMNLQPGQTQQFLIKPKYYPAQKVYSGGQSVEGSLPLRAGQVPGAASLEDGNHTGRIKVV
FTPTICKMTCIKGKCLNSCEQGNTTTIISENGHAADTLTAPNFRVVVCHLPCMNGGQCSA
RDKCQCPPNFTGKFCQIPVRNAHLPQQQYYQQAGKTAGSQVIHSTHTLPLTVAGQQMKFP
PNIVNIRVKHPPEASVQIHQVSRVDNSATRQKVKGVQPGQPQVTYHRAPIQKTQVHQASK
SVYHHQHLSPHLYPVSSKVQLGRCFQDTTGSMVGGGALPLGSGVMVECPHGYKRVNATYC
QDINECQLQGVCPNGECLNTMGSYRCTCKPGYMPDLTLSTCVPDNPMISEEKGPCFRFVS
AGKQCMHPLSAQLSKQLCCCSVGKAWGLHCEKCPLPGTAAFKEICPGGIGYTVTGPYKKI
YHLGPSRVPTSGGVKTPVTHAEPIATRAPLQARQEPVEALTSSEKHNPQGQQEVIIEKVT
TAAPDKELTFFDEQEKLIVEPGQPQLSPGISTINLDPRYPDLVLITSPPAPVKLPPETST
SSASQVIAPTQVTEINECTVNRDICGRGYCINLPVGYTCICYAGYELNNQQTRCVDVDEC
TNRPRPCSNGRCENTVGSFHCVCRAGFVANEERTNCTDIDECQDPSTCPSEVCVNSPGSY
TCFPCPDGYKGRNNHCSDIDECLESSVCANGKCSNLDGSFVCTCNQGYEPATDGKSCKDV
DECLRGLLCTNGQCRNTEGSFQCTCNPGFLLSAAGDQCEDIDECLEARNPCQGEGLCLNT
EGSYQCVCRDGYQQMNSTMCQDINECLLYEFCVEHGECLNTDGSFQCICELGFSLSADGR
SCEDIDECSGPGSPCQEEGICMNTLGSYQCNCRDGFQQINSTMCEDINECLLSELCAPHG
ECLNTDGSFQCICEQGFSVSADERKCEDVDECVNNTLCDSHGFCENTVGSYRCLCDQGFQ
DPQDGQGCVDVNECEMLSGVCGEALCENVEGSFLCLCSNENQEYDPMTGQCRFRTVPEEK
KECYYNLNDANFCDNVLTSNVTKEECCCTLGAGWGDNCEIFPCPVLGTAEYNALCPEGKG
FIPNKDSAYAVGGQTYKDADECMLFGEACKNGFCLNTEPGYECYCKQGHYYDPVKMQCLD
IDECLDEFSCVDGQCMNTEGSYNCFCIHPLVLDATGKRCFNPEESSEQTAETDVFEDICW
QHVSNDFVCSRPLHGRKTTYTECCCLYGDAWGMQCALCPNRELEDYAEICNLPSSWNRRA
YGQDALTAFNPDYPEPGAEYESQYSQPGTLPLFVGEDSQFNSFEGLRAEECGILNGCENG
RCVRVQEGYTCDCFDGYHLDMARMACVDVNECSELNHRMSLCKNAECINTEGSYKCVCLP
GYAPSEQPNYCIPMNLDEDSELE
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atggaactattttggggcagatggagcgttttgctctgcgtgggcatctccttgttcccg
gccattgcttcctctgacaagggacgctttcggagaatcacttatgtgttacacccaggg
caggttgcggctgaaagccagcagatgagctccgtttcccgggtgggagctgcgggtcag
cggcagccgccctcatttcaggtgcagctgaacggctacaccagccagataaggacccgc
aggatgggcagctccagccccagcgtgcagctccgccaggagtcccagttcgctccgcgc
ccacagctccgccagccgcacggcgtccagcttcagcacaacggcggcggcagccccagc
cccagccccagcatgcagctccgccagccgcacagcgtccagcttcagcacatcagcagc
aaccccagcgtgcagctccgccagcagctaccgaacgcccggaaaatacagttgcctcag
aaacaacagcttcttttacacggggtaaatgtctgtggagggcagtgctgccacggctgg
agcaaagcgcccggctctcagaggtgcaccaaaccaaattgtgtgccacaatgccaaaat
ggagggatgtgcctgcggcctcatttttgtgtgtgtaagccgggcactaaaggtaaagcc
tgtgaagaaactactgtacaagatacctcttccacttcagtgaatggaggccaagacact
gtggttccccaccggcctatccctcaccaggcctcccagcagattgtagctccaaatggg
caggtccctctcaaaaccggccctatggcgcagatgacgtttactctcaaacagaagcca
cctgtcatggtatcgcaacagttacagtcacaactgatacacctgccctcccagccactg
accatgaatctccagcctggccagacccagcagtttctgatcaagcccaagtactacccg
gctcagaaggtgtattccggtggacagtctgttgagggttccctgcccttgagagctggg
caggttccaggtgcagcgtctcttgaagatggaaaccacaccggccgcatcaaggtggtc
tttactccaaccatctgcaaaatgacttgtatcaaaggcaagtgcctgaacagctgtgag
caggggaacaccacaaccatcattagtgaaaacggccatgccgctgacaccctgacagca
ccaaactttcgagtggttgtctgccaccttccgtgcatgaatggaggccagtgcagtgcc
cgggacaaatgccagtgccctcctaacttcactggcaagttctgccaaatcccagtacgc
aacgcccaccttccacagcaacagtattatcaacaggccggcaagaccgctgggtctcaa
gtcattcattctacacacaccttgccactaaccgttgctggacagcagatgaaattccct
cccaatatagtaaatatccgtgtcaagcatcctccagaagcctctgtccagattcatcag
gtttccagagtggataactctgcgacaaggcaaaaagtgaaaggagtacagccaggccag
ccccaggtcacttaccacagagctcccatccaaaaaacccaggtgcaccaggcatccaag
tccgtgtatcaccatcagcatctcagccctcatctctaccctgtctcttccaaagttcag
cttggtcgctgtttccaagatactacaggttcaatggttgggggaggagctctgccgttg
ggatctggagtaatggtggaatgtccccatggttacaagagggttaacgccacttattgc
caagatatcaatgaatgccagctgcagggcgtgtgtccaaatggtgagtgtttgaatacc
atgggcagctacagatgtacctgtaaaccaggctatatgccagacctgacgctttccacc
tgtgtccctgataatcctatgatctctgaagagaaagggccctgtttccggtttgtcagt
gcaggaaagcagtgcatgcaccctctctctgctcagctcagcaagcagctctgctgttgc
agtgttggcaaggcctggggcctacactgtgagaaatgtccccttccaggaacagctgct
tttaaagaaatctgcccaggtgggataggttatacagtaactggcccctacaaaaagatt
tatcacctgggccctagcagggttccaactagtggaggtgtcaagaccccggtcactcat
gctgaacccatagctactcgagcaccactccaggcaaggcaggagccagtggaagccttg
acctcctcagagaaacacaacccacaggggcagcaggaggtgatcatagagaaagtaaca
actgcagcacctgataaggaacttactttttttgatgagcaagaaaaattgatagttgaa
cctggtcagcctcaactttctccaggtatttcaaccatcaatctggatccaagataccca
gacttggtcctgataacgtctcctcctgctcccgttaagcttccgcctgaaacctccact
tcaagtgcaagtcaagtcattgcgcccacccaagtaacagaaatcaatgaatgtacggta
aatcgtgacatctgtggacgtggatattgcatcaatttacctgtgggctacacatgtatc
tgttatgctgggtacgagcttaataaccagcagacaagatgtgtagatgttgatgaatgt
acaaacagaccacgcccctgttccaatggacgatgtgaaaacacagtaggaagttttcat
tgtgtttgcagagcaggatttgtggccaatgaagaaagaactaactgcactgatatcgac
gagtgccaagatcccagcacatgtccatctgaagtctgtgtcaactcccctggctcctac
acgtgtttcccttgtccagatgggtacaaaggcagaaataatcattgcagtgacatcgat
gaatgcctggagagttctgtgtgtgccaatggtaaatgttccaacctggatggatccttt
gtttgcacatgcaaccaaggatatgagccagctactgatggcaagtcatgtaaagatgta
gacgaatgtctccgtggtttattgtgcacgaatgggcagtgcagaaacacagagggttcc
ttccagtgtacttgtaatccaggattcctactttctgctgctggggaccagtgtgaagac
attgatgaatgcttggaagcaagaaacccttgtcaaggagaaggcctttgcctaaacacc
gaaggctcctatcaatgtgtttgccgagatggctatcagcagatgaatagcacaatgtgc
caagatatcaatgagtgcctgctgtacgaattctgtgttgaacacggggaatgcttgaac
acagatggttccttccagtgtatctgtgaactgggattttcattgtctgcagacgggcgc
agttgtgaagacatcgatgagtgctcgggaccgggaagcccctgccaggaagaaggcatt
tgcatgaacactctgggttcctatcagtgtaattgccgagatggcttccagcagataaat
agcactatgtgtgaagatatcaatgagtgcctgctgtccgaactctgtgctccacacggg
gaatgcttgaacacagatggatccttccagtgtatctgtgaacaggggttttccgtctcc
gcagatgagcgcaaatgtgaagatgttgatgaatgtgtaaacaacactttgtgcgacagc
catgggttctgtgaaaacacagttggctcttatcgctgcctgtgtgaccaggggtttcag
gacccacaggatgggcaagggtgtgtggatgtgaacgaatgcgagatgctgagcggagtg
tgcggagaagctctctgtgaaaatgtggagggctctttcctgtgcctgtgctcaaacgag
aaccaagagtacgacccaatgacaggacaatgccgcttccgcaccgttccagaagagaag
aaagaatgttactacaatttgaatgatgctaacttctgcgacaatgtcctgacttccaac
gtcactaaagaggagtgctgctgtacgctgggagctggctggggagacaactgtgaaatc
ttcccatgccctgttttgggaactgctgaatataatgcattgtgtcctgaagggaaaggc
ttcatccccaataaggactcagcatatgctgtcggtgggcaaacttacaaagatgcagat
gaatgtatgttgtttggagaggcctgtaaaaatggcttctgcttgaatactgagccaggc
tatgagtgctactgcaagcaaggccattactatgatccggtcaaaatgcaatgtctggac
attgatgaatgcctggatgaattcagctgtgttgatggtcagtgtatgaacactgaggga
tcatacaactgtttctgcatacacccattggttttggatgctacgggaaaacgctgcttt
aatccagaagaatcgagtgaacaaacagcggaaactgatgtctttgaggatatctgttgg
cagcatgtgagcaatgatttcgtgtgcagccgacctctacatggacgaaagaccacctac
acggagtgctgttgtctgtacggtgatgcatggggcatgcagtgtgccctttgtccaaat
cgagaattagaggattatgctgagatctgcaatcttcccagttcatggaatcggcgtgcg
tatggccaagatgctttgacagcttttaaccctgactatccagagccaggagcagaatat
gaatcccagtattcccagccgggaacattaccactctttgtgggcgaagacagtcagttt
aacagcttcgagggactccgggcagaagaatgtggcatcttgaatggttgtgagaatggc
cgttgtgtgagggtgcaggaaggctacacatgtgactgttttgatggctaccacttggat
atggccagaatggcctgtgttgatgtgaacgaatgcagtgaactcaaccacagaatgtca
ctgtgcaagaacgccgagtgcatcaacactgaaggttcatacaaatgcgtgtgtctacca
ggctatgcaccatcagagcagcccaactactgcatacctatgaatctagatgaagacagt
gagctggagtag
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integrated database retrieval system
