KEGG   Latimeria chalumnae (coelacanth): 102356927
Entry
102356927         CDS       T02913                                 
Symbol
IFT122
Name
(RefSeq) intraflagellar transport 122
  KO
K19656  intraflagellar transport protein 122
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:lcm03037]
    102356927 (IFT122)
Cilium and associated proteins [BR:lcm03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   102356927 (IFT122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122 WD40 Zn_ribbon_IFT122_C Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz EIF3I ANAPC4_WD40 TPR_GEMI5 WDR55 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_WDR19_1st TPR_IF140-IFT172 TPR_IFT80_172 WD40_MABP1-WDR62_2nd TPR_7 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_EML Beta-prop_IFT140_1st eIF2A Beta-prop_WDR75_1st Beta-prop_NWD2_C Beta-prop_SPT8 TPR_COPA_B Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 102356927
NCBI-ProteinID: XP_005997893
Ensembl: ENSLACG00000013147
LinkDB
Position
Un
AA seq 1087 aa
MRAVPTWIDKVHDRDKVEQCIYDLAFKPDGTQLIVAAGNRVLVYDTSDGTLIQPLKGHKD
TVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDSIQCVAYNPLTHQLASCSSS
DFGLWSPEQKSVSKHKASSKITCCSWTNDGQYLALGMFNGVVSIRNKNGEEKVKIERPGG
ALSPIWSISWNPSKDEHHDILAVADWGQRLSFYQLSGKQIGKDRVLNFDPCCASYFSKGE
YIVMGGSDKQVSLYTKDGVRLGTIGEQSSWVWTCRVKPDSNYVVIGCQDGTIAFYQLIFS
TVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKCRELVKKIAIYKNRLAIQLPEKILIYE
LFSDDTSDMHYRVKEKITKKFECNLLVVCSQHIILCQEPNANSVAWNTQCEDMLCFSGGG
YLNIKASNFPVHQQKLQGFVVGYNGSKIFCLHVYSMSAVEVPQSAPMYQYLERKLFKEAY
QIACLGVTDTDWRELAMEALEGLDIKTAKKAFVRVRDLRYLELINSIEERRKRGETSDEL
FLADVHSYQGKFHEAAKLYKKSGNKNRALNMYTDLRMFEYAKEFLGSGDPKDTKVFITKQ
ADWARNINEPKAAAEMYLSAGEHMKAIEIIGDHGWADMLIDIARKLDKAEREPLSKCALY
FKKLEHHGYAAETYTKMGDLRALVRLYVETQQWDEAFALVEKHLEFKDEVFVPYAQWLAE
NDRFEEAQKAFHKAGRQDEAVKVLEQLTHNAVVESRFNDAAYYYWMLSMQCLDIANEKEE
KTEMLRKFHHFQHLAELYHVYHSIQRYTDEPFSSHLPETLFNISRFLLHNLTKETPLGIS
KVNTLYALAKQSKALGAYKLARHAYEKLQGLRIPARFQESVELGSLTIRSKPFQDSEELV
PMCYRCSTNNPLLNNQGNVCINCRQPFVFSASSYEVLPLVEFYLEDGIEDEEAVSLIDLE
VPRTDKRNDRWQEMRSEDAQTLRFDDDVENQDNDPFTAKLSFEQGGSEFVPVVVNRSVLQ
SMSRRDVLIKRWPKPLRWQYYRSLLPDVSITMCPSCYQMSHSEDYELLVLQHNRCPYCRR
PIDEPNQ
NT seq 3264 nt   +upstreamnt  +downstreamnt
atgagagctgtgcccacttggatagacaaggtccacgacagagacaaggtggaacagtgc
atatatgaccttgcgtttaaacctgatggtacccagctgattgtcgcagcaggcaataga
gtcctggtttatgacacttcagatggaaccttaattcagcctttgaaaggacataaggac
actgtatactgtgtagcttacgctaaggatggcaagcggtttgcatcgggatccgctgac
aagagtgtcattatttggacctccaagttagaggggatccttaaatacacccacaatgac
tcaattcaatgtgttgcatataatccacttacccaccagctggcatcctgttcctcaagt
gactttggtctctggtctccggaacagaaatctgtgtctaagcacaaggccagcagtaag
atcacatgctgcagttggaccaatgatgggcagtacctggcactgggaatgtttaatgga
gtggtgagcattaggaataagaatggggaggagaaggtcaaaatcgaacgtcccggtgga
gcgctgtccccaatctggtccatcagctggaatccttcaaaagatgagcaccacgatatc
ttagctgtggctgactggggccagagactgtctttttaccaacttagcggcaaacagatt
gggaaggacagggtgctgaactttgacccttgctgtgccagctacttctcaaaaggggag
tacattgtaatgggaggatcggacaagcaggtctctctgtatacgaaggatggggtgcgt
cttggcaccataggggagcagagttcctgggtgtggacatgcagagtgaagccagattcc
aactatgtggtgattggttgccaagacggtacaattgcattttaccagctgatttttagt
accgtacatgggctgtataaagatcgctatgcctacagggacagtatgacagacgtgatt
gttcaacacctcatcacggagcagaaagtaagaattaaatgccgggagctggtgaagaaa
attgccatttacaagaacaggttggccattcagctaccggagaaaattctgatctatgag
ctgttttcggacgatacgtctgacatgcattaccgtgtgaaggagaaaatcaccaagaag
tttgaatgcaacttacttgttgtatgttcgcagcatatcattttatgccaggagcccaat
gcgaacagcgttgcttggaacactcagtgtgaggacatgctgtgcttctccggagggggt
tacctcaacatcaaagctagcaacttcccagtgcaccagcagaagctccagggcttcgtg
gtgggttacaatggctccaagatcttctgcctgcacgtctactccatgtccgcggtggaa
gtcccacagtctgcacccatgtatcagtatttggagcgaaagctgtttaaggaagcctat
cagattgcctgtttaggagtcacggacacggactggcgagagcttgccatggaggccttg
gaaggactggacatcaaaactgctaaaaaggctttcgtcagggtgcgagacctccgttac
ctggagctgattaacagcatcgaggagaggaggaagcgcggcgagaccagcgacgagcta
ttcctggctgacgtccacagctaccaggggaagttccacgaggcagcgaagctatacaag
aagagcggaaacaagaaccgggcgctaaacatgtatacggacctccgcatgttcgagtat
gccaaggaattccttggttctggagatcccaaagatacgaaggtctttattaccaagcag
gcggactgggcccggaacatcaacgagcccaaagcggccgcagaaatgtacctgtcagcc
ggagagcacatgaaggccatcgagatcatcggagaccacggttgggctgacatgttaatt
gatattgctcggaagctggacaaggcagagcgcgagccgttatccaagtgcgccctctac
tttaaaaagctggagcaccacggatatgctgcggagacctacacgaagatgggggacctg
cgagccctggtccggctttacgtggagacgcagcagtgggatgaggccttcgccctggtg
gaaaagcacctggagtttaaagatgaggtgtttgtcccctatgcccagtggctggctgag
aatgatcgtttcgaggaagcacaaaaagcgttccacaaggctggcaggcaggacgaggca
gtgaaagtgctggagcagctgactcacaacgccgtggtggagagcaggtttaatgatgca
gcttattactactggatgctgtccatgcagtgtctggatatagccaatgagaaagaagag
aagacggagatgctaagaaagtttcatcatttccagcatctggccgaactctatcacgtc
taccattccatccagagatacactgacgagccatttagctcacacctgcctgaaaccctg
ttcaacatctccaggtttttgctacacaacctgacgaaagaaacccctctgggaatctct
aaagtaaacacactgtatgccctggcaaagcagagtaaagccctgggcgcatataaactg
gcgcggcatgcctacgagaagctgcaggggctccgcatcccggccaggttccaagaatcg
gtggagctgggtagtctgaccatccgatccaaaccattccaggatagcgaggagctggtg
cccatgtgctacaggtgttccacaaacaaccccctgttaaacaaccaaggcaacgtgtgc
atcaactgcaggcaaccctttgtcttctctgcgtcgtcctatgaggttttgcctctggtt
gagttctacctggaagacgggatcgaggatgaagaggcagtgtctctgattgacctagaa
gtccccagaacagacaagagaaatgacaggtggcaagagatgaggagtgaggatgctcaa
actctgagatttgatgacgatgtagaaaaccaagacaacgacccattcactgcgaaactg
agctttgagcaagggggttcggagtttgtccccgtggtagtgaaccgctctgtcttgcag
tcgatgagcaggagggatgttctgattaagcgctggcccaagcctctgagatggcaatat
taccggtccctgctgcctgatgtctccatcacaatgtgtccctcttgttaccagatgtcc
cacagcgaggactacgagctcctggttcttcaacacaatcgctgtccgtactgccgtcgg
ccgatagatgagcccaaccagtga

DBGET integrated database retrieval system