Latimeria chalumnae (coelacanth): 102356927
Help
Entry
102356927 CDS
T02913
Symbol
IFT122
Name
(RefSeq) intraflagellar transport 122
KO
K19656
intraflagellar transport protein 122
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcm03037
]
102356927 (IFT122)
Cilium and associated proteins [BR:
lcm03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
102356927 (IFT122)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_IFT122_2nd
Zn_ribbon_IFT122
WD40
Zn_ribbon_IFT122_C
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
EIF3I
ANAPC4_WD40
TPR_GEMI5
WDR55
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_WDR19_1st
TPR_IF140-IFT172
TPR_IFT80_172
WD40_MABP1-WDR62_2nd
TPR_7
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_IFT140_1st
eIF2A
Beta-prop_WDR75_1st
Beta-prop_NWD2_C
Beta-prop_SPT8
TPR_COPA_B
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
102356927
NCBI-ProteinID:
XP_005997893
Ensembl:
ENSLACG00000013147
LinkDB
All DBs
Position
Un
AA seq
1087 aa
AA seq
DB search
MRAVPTWIDKVHDRDKVEQCIYDLAFKPDGTQLIVAAGNRVLVYDTSDGTLIQPLKGHKD
TVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDSIQCVAYNPLTHQLASCSSS
DFGLWSPEQKSVSKHKASSKITCCSWTNDGQYLALGMFNGVVSIRNKNGEEKVKIERPGG
ALSPIWSISWNPSKDEHHDILAVADWGQRLSFYQLSGKQIGKDRVLNFDPCCASYFSKGE
YIVMGGSDKQVSLYTKDGVRLGTIGEQSSWVWTCRVKPDSNYVVIGCQDGTIAFYQLIFS
TVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKCRELVKKIAIYKNRLAIQLPEKILIYE
LFSDDTSDMHYRVKEKITKKFECNLLVVCSQHIILCQEPNANSVAWNTQCEDMLCFSGGG
YLNIKASNFPVHQQKLQGFVVGYNGSKIFCLHVYSMSAVEVPQSAPMYQYLERKLFKEAY
QIACLGVTDTDWRELAMEALEGLDIKTAKKAFVRVRDLRYLELINSIEERRKRGETSDEL
FLADVHSYQGKFHEAAKLYKKSGNKNRALNMYTDLRMFEYAKEFLGSGDPKDTKVFITKQ
ADWARNINEPKAAAEMYLSAGEHMKAIEIIGDHGWADMLIDIARKLDKAEREPLSKCALY
FKKLEHHGYAAETYTKMGDLRALVRLYVETQQWDEAFALVEKHLEFKDEVFVPYAQWLAE
NDRFEEAQKAFHKAGRQDEAVKVLEQLTHNAVVESRFNDAAYYYWMLSMQCLDIANEKEE
KTEMLRKFHHFQHLAELYHVYHSIQRYTDEPFSSHLPETLFNISRFLLHNLTKETPLGIS
KVNTLYALAKQSKALGAYKLARHAYEKLQGLRIPARFQESVELGSLTIRSKPFQDSEELV
PMCYRCSTNNPLLNNQGNVCINCRQPFVFSASSYEVLPLVEFYLEDGIEDEEAVSLIDLE
VPRTDKRNDRWQEMRSEDAQTLRFDDDVENQDNDPFTAKLSFEQGGSEFVPVVVNRSVLQ
SMSRRDVLIKRWPKPLRWQYYRSLLPDVSITMCPSCYQMSHSEDYELLVLQHNRCPYCRR
PIDEPNQ
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgagagctgtgcccacttggatagacaaggtccacgacagagacaaggtggaacagtgc
atatatgaccttgcgtttaaacctgatggtacccagctgattgtcgcagcaggcaataga
gtcctggtttatgacacttcagatggaaccttaattcagcctttgaaaggacataaggac
actgtatactgtgtagcttacgctaaggatggcaagcggtttgcatcgggatccgctgac
aagagtgtcattatttggacctccaagttagaggggatccttaaatacacccacaatgac
tcaattcaatgtgttgcatataatccacttacccaccagctggcatcctgttcctcaagt
gactttggtctctggtctccggaacagaaatctgtgtctaagcacaaggccagcagtaag
atcacatgctgcagttggaccaatgatgggcagtacctggcactgggaatgtttaatgga
gtggtgagcattaggaataagaatggggaggagaaggtcaaaatcgaacgtcccggtgga
gcgctgtccccaatctggtccatcagctggaatccttcaaaagatgagcaccacgatatc
ttagctgtggctgactggggccagagactgtctttttaccaacttagcggcaaacagatt
gggaaggacagggtgctgaactttgacccttgctgtgccagctacttctcaaaaggggag
tacattgtaatgggaggatcggacaagcaggtctctctgtatacgaaggatggggtgcgt
cttggcaccataggggagcagagttcctgggtgtggacatgcagagtgaagccagattcc
aactatgtggtgattggttgccaagacggtacaattgcattttaccagctgatttttagt
accgtacatgggctgtataaagatcgctatgcctacagggacagtatgacagacgtgatt
gttcaacacctcatcacggagcagaaagtaagaattaaatgccgggagctggtgaagaaa
attgccatttacaagaacaggttggccattcagctaccggagaaaattctgatctatgag
ctgttttcggacgatacgtctgacatgcattaccgtgtgaaggagaaaatcaccaagaag
tttgaatgcaacttacttgttgtatgttcgcagcatatcattttatgccaggagcccaat
gcgaacagcgttgcttggaacactcagtgtgaggacatgctgtgcttctccggagggggt
tacctcaacatcaaagctagcaacttcccagtgcaccagcagaagctccagggcttcgtg
gtgggttacaatggctccaagatcttctgcctgcacgtctactccatgtccgcggtggaa
gtcccacagtctgcacccatgtatcagtatttggagcgaaagctgtttaaggaagcctat
cagattgcctgtttaggagtcacggacacggactggcgagagcttgccatggaggccttg
gaaggactggacatcaaaactgctaaaaaggctttcgtcagggtgcgagacctccgttac
ctggagctgattaacagcatcgaggagaggaggaagcgcggcgagaccagcgacgagcta
ttcctggctgacgtccacagctaccaggggaagttccacgaggcagcgaagctatacaag
aagagcggaaacaagaaccgggcgctaaacatgtatacggacctccgcatgttcgagtat
gccaaggaattccttggttctggagatcccaaagatacgaaggtctttattaccaagcag
gcggactgggcccggaacatcaacgagcccaaagcggccgcagaaatgtacctgtcagcc
ggagagcacatgaaggccatcgagatcatcggagaccacggttgggctgacatgttaatt
gatattgctcggaagctggacaaggcagagcgcgagccgttatccaagtgcgccctctac
tttaaaaagctggagcaccacggatatgctgcggagacctacacgaagatgggggacctg
cgagccctggtccggctttacgtggagacgcagcagtgggatgaggccttcgccctggtg
gaaaagcacctggagtttaaagatgaggtgtttgtcccctatgcccagtggctggctgag
aatgatcgtttcgaggaagcacaaaaagcgttccacaaggctggcaggcaggacgaggca
gtgaaagtgctggagcagctgactcacaacgccgtggtggagagcaggtttaatgatgca
gcttattactactggatgctgtccatgcagtgtctggatatagccaatgagaaagaagag
aagacggagatgctaagaaagtttcatcatttccagcatctggccgaactctatcacgtc
taccattccatccagagatacactgacgagccatttagctcacacctgcctgaaaccctg
ttcaacatctccaggtttttgctacacaacctgacgaaagaaacccctctgggaatctct
aaagtaaacacactgtatgccctggcaaagcagagtaaagccctgggcgcatataaactg
gcgcggcatgcctacgagaagctgcaggggctccgcatcccggccaggttccaagaatcg
gtggagctgggtagtctgaccatccgatccaaaccattccaggatagcgaggagctggtg
cccatgtgctacaggtgttccacaaacaaccccctgttaaacaaccaaggcaacgtgtgc
atcaactgcaggcaaccctttgtcttctctgcgtcgtcctatgaggttttgcctctggtt
gagttctacctggaagacgggatcgaggatgaagaggcagtgtctctgattgacctagaa
gtccccagaacagacaagagaaatgacaggtggcaagagatgaggagtgaggatgctcaa
actctgagatttgatgacgatgtagaaaaccaagacaacgacccattcactgcgaaactg
agctttgagcaagggggttcggagtttgtccccgtggtagtgaaccgctctgtcttgcag
tcgatgagcaggagggatgttctgattaagcgctggcccaagcctctgagatggcaatat
taccggtccctgctgcctgatgtctccatcacaatgtgtccctcttgttaccagatgtcc
cacagcgaggactacgagctcctggttcttcaacacaatcgctgtccgtactgccgtcgg
ccgatagatgagcccaaccagtga
DBGET
integrated database retrieval system