Latimeria chalumnae (coelacanth): 102358334
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Entry
102358334 CDS
T02913
Symbol
KDM2A
Name
(RefSeq) lysine demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102358334 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102358334 (KDM2A)
04121 Ubiquitin system [BR:
lcm04121
]
102358334 (KDM2A)
03036 Chromosome and associated proteins [BR:
lcm03036
]
102358334 (KDM2A)
Enzymes [BR:
lcm01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
102358334 (KDM2A)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
102358334 (KDM2A)
Ubiquitin system [BR:
lcm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
102358334 (KDM2A)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
102358334 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
102358334 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
JHD
CCDC106
Motif
Other DBs
NCBI-GeneID:
102358334
NCBI-ProteinID:
XP_014345868
LinkDB
All DBs
Position
Un
AA seq
973 aa
AA seq
DB search
MQLRIYSIEDRTRVPVKFRYPFYYEMCWYVLERYFYCLQKRSHLIKDFQRESLDLDSEGN
GLETIQIKAEEEENGLGADEKERRRLSAHKFGTPNGAHDDHDCMARSFKGHPAGSAQLRW
TPAKLCSDTRSTVNGGGGRLLQGSGPASWVHLTPFELEGLQTLLEKLESLPEHKRCVPSG
IEDENALLTDVKNLLAEHANDDPELAFTGIPIIQWPKRDKLRIQPPKPKLRTPIQITKPH
TMRPPPRSNTSSVKPVKRYPTAMRRRRVRCRKCQACRMVECGVCHYCRDMKKFGGPGRMK
QSCVLRQCLAPRLPHSVACLICEDVDREEETKSFDMKLMECSLCYEIVHPGCLEVEGDGV
ISEELPNCWECPKCSQEDKEDDDTEKVPKASPRLNPSVLWEKRLLRSERHLEAAAAAAPR
GRRASGESEWRQRQARQQLEMLPRRKQCNYLLLRKRKLAMVEQRVRKKIKLERERILLQE
KRKSEEVEEPSVRAKILRPLRSREEPLLSGSLSPAARLKVLHTMGKPRTISTRSSSSSSS
SSSSSSSSSSCTSARAGPSQLEPRGSRDERFKRRQILRLQTAERPKQLSREKENRPNGQK
NLSEIERAKIRGTYLTVTLQRPPKDFKGASIVPKLQAITPAGATCTATATTSLRQAPRVV
TRGSSGEADGGGGSVNGGRSSRLESESEEEENEGEEEEEEDIWMQKDVWMSVFHYLSRRE
LCECMQVCKTWYKWCCDKRLWTKIDLSRCKTIVPQALSGIIKRQPVTLDLSWTNISKKQL
TWLINRLPGLKDLILAGCSWSAISALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPTEK
PGQDNRSKLRNMADFRLAGLDITDATLRLIIRHMPLLSRLDLGHCGHLTDQSVNLLTAVG
SSTRNSLTEINLAGCNKLTDQCLMYLRRISNITLIDLRGCKHISRGGCEQLISDLSINSL
YCLSDEKLIQKIS
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgcgcatctacagcattgaggacaggactcgggtgccagtgaagttccgctac
ccgttttactatgagatgtgctggtatgtgctggagcgttacttctactgcctgcagaaa
cgctcccacctcatcaaggacttccagagggaatcgctggacctggattcagagggaaat
ggattggaaaccatccagattaaagccgaggaggaagaaaatgggctgggcgcagatgag
aaggaacgccgtcggctcagtgcccacaagtttggcacacccaatggagcgcatgatgac
catgactgcatggcccgcagcttcaaaggccacccagctggctctgcccagctgaggtgg
acccctgccaagctctgctccgacaccaggagtacggtgaatggtggcggtggtaggctc
ctgcagggctcaggccctgcttcctgggtgcacctgacgccattcgaactggaggggctg
cagactttactagagaagttggaatcgctaccagagcataagcgttgtgtgccatcaggg
atcgaggacgaaaatgcactactcacagatgtaaagaatttactagcggaacatgcaaac
gatgaccctgagctggccttcactggcatccccatcatacagtggccgaagagagataag
ttaagaattcagccaccaaaaccgaagttgcggacaccgatccagatcaccaaaccccat
actatgaggcccccgcctcgcagtaacaccagcagtgtgaagccagtgaaacggtacccc
acggccatgcggcggcggcgagtgcgctgccggaagtgtcaggcctgccggatggtggag
tgtggtgtctgccattactgcagggacatgaagaagtttggcgggccagggcggatgaag
caatcctgtgtgctgcggcagtgcttggcgccacggttacctcattcagtagcatgtctc
atctgtgaagatgtggatcgggaggaggagaccaagagctttgacatgaagctgatggag
tgctcgctctgttacgagattgtgcatcccggctgtttggaggtggagggagatggcgtg
attagtgaggagctgcccaattgctgggagtgtccaaaatgttcccaggaagataaggaa
gatgatgatactgaaaaggttccgaaagccagcccgcggctgaaccccagcgtcctgtgg
gagaagcggttactgcgcagcgagaggcacttggaggcggcagcagcagcagcgccccgg
ggccggagagcaagtggtgagagcgagtggcggcagcggcaggccaggcagcagctggag
atgttgcccaggcgcaagcaatgcaactacctgctgctacggaagaggaagctagcaatg
gtggagcagagagtcaggaagaagataaaactggaaagagagcgaattcttttacaagag
aagcgaaagtcggaagaagtggaagagccttcggtccgtgccaaaatcctacggccactg
cggagccgggaggagccactgctctcgggctcgctgtccccggccgctcgcctgaaggtg
ctgcacaccatggggaagcctcggaccatcagcacccgctcttcctcttcctcgtcatca
tcatcctcatcctcttcatcatcatcctcatgtacctctgccagggctgggcccagccag
ctggagccacgtgggagccgggacgagcgcttcaagcggcggcagatcctgcgactgcag
acagcagagcggcccaagcagctgtcacgggagaaggagaaccggcctaatgggcagaag
aacctgtcggagatagagcgggccaagatccggggcacctacctcactgtcaccttgcag
aggccccccaaggacttcaagggggcttccatcgtgcccaagctgcaagccatcaccccg
gctggagccacgtgcacagccacagccaccaccagcctgaggcaggcgccccgggtggtg
acgcgaggcagttccggggaggcagatggcggcgggggcagcgtgaatggtggcaggagc
agccggctggaatcggagagtgaggaagaggagaatgaaggagaagaagaggaggaggaa
gatatttggatgcagaaggacgtctggatgtcggtgttccactacctgagccggcgggag
ctgtgtgaatgcatgcaggtctgcaagacgtggtacaagtggtgctgtgataagaggctg
tggacaaagattgacctgagccgctgcaagaccatcgttccacaagccctgagcggcatt
atcaaaaggcagcctgtcacgctggaccttagctggaccaacatctccaagaagcagctg
acgtggctcatcaatcgactaccaggtttaaaagacttgatcttggctggctgttcatgg
tcagccatctctgcactcagcacttccagctgcccgctgctaaggacgctcgatctacgg
tgggcagtggggatcaaagatccccagatacgggatttactgaccccaccaacagaaaaa
ccagggcaggacaatcgcagcaagctacggaacatggcagacttccggctggcagggctg
gacatcacagatgctacgctacggctcatcatccgtcacatgccgctcctctcccggctg
gaccttggtcactgtggccatctgactgaccagtctgtcaacctgctgactgcggttggt
tcctccacgcgcaactccctcaccgagatcaacctggcaggctgcaataagctgacagat
caatgcctgatgtacctgaggcggatctccaacatcaccctgattgacctgcggggctgc
aaacacatcagcagggggggctgcgagcagctaatctcggacctgtccatcaacagccta
tactgcctctctgatgagaagctcatccagaagattagctga
DBGET
integrated database retrieval system
