Latimeria chalumnae (coelacanth): 102358625
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Entry
102358625 CDS
T02913
Name
(RefSeq) chromosome unknown open reading frame, human C5orf42
KO
K22859
protein JBTS17
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcm03037
]
102358625
Cilium and associated proteins [BR:
lcm03037
]
Primary cilia and associated proteins
Ciliogenesis and planar polarity effectors (CPLANE) complex
102358625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Joubert
Motif
Other DBs
NCBI-GeneID:
102358625
NCBI-ProteinID:
XP_014350626
LinkDB
All DBs
Position
Un
AA seq
3338 aa
AA seq
DB search
MELKLEVLASISIKHKKPWPRVCWLGKEKERVFLLGDKHMSEINLLSGRTKKKAPKLQSQ
LKNAIAITTSRNGAWLAGILHSGDLFLWNKDRDCLKIVPAAEEAKKVATATQECTVNIYL
FVSGDGKRVLFTTSPGHIFLWESADNEDLTSVSYPSLVGKWSQIVPDESVKLPSTLDKEA
AVEAVFSKDETLGDCCLCSFVFTSGACLILTFLAVQWYENAEKYISSVSFQVKWATQECS
LTTLFPRCEPIKSRGAVVTAFSEDGLILAVAINQKDPKATQVLFVNSLNFVTVSSSLKGC
GSKDLKIPLKFTRSYWVADMSWTHDNLFLACVLKRGALLFVTRLGELLTLVTFGCSVEFG
PAEFIPLHPLITYRPQQSVFQSTDPNHSPGSSASENDSMRQRYSVTTHPRFPYLLVSDGY
MITALRASDNHSPSNFIKSLLLDAVERLEHMRQAFLKCQPKEKKLKLKSMSSLKDSLMQH
QVNPKSTLPTIPRFLQEEEEASQVQEKSVVGQCNEDESDDGCHFPNDIPTSQSKKQNSPF
DMMDQCRLEFASMFDTIHAKEDPDEADDFSKEFKQIQKILLTAWSTGILLKDVEEKEKLL
NYTVRCIVRFAHLLQFIKCPLPMFVENLSDKTLKKLVKKDSWIYRVLHLFHQCLTVLFWD
TAHKQSLTRIVKLTSEITKLIFLQQKDQLFSQTLLGCFYILNQTAHYLNIIYAPHCELFP
VSPSSCEAITLDSFNIPLFQPVEDNIQKLSSLLLLPCHAVNLAQTVSDRLTILWQVLYRR
TLWYQSHLGRQKNLHGRNSEDEKSRSEQSTVALLCSRIQAVLQSKRQNLEPNKTLNTVLG
SCHFPGEELFLLGSYMESVKVWRTALQKEIGKGGKRTVFLQTRYYLAILYSHLYHYNLCA
AQGLCDQLVREVLNRPQLSAEDVQNSVVAECPRLEPLTEREIYNEVSFAVVQSMARFMAA
YFTNQPLYVLPPHCVDILPSLYVKPDHLPRVVPLQHSRMASVVRDQQLSALWTVEYAMDL
FLIGGLVPEATWLAHRLGDWKTAVSLGLAYSLYCQNNSYFSSLRWRELHLPLELRPAQVF
QDKLQSILGQPAKSGIGNGEISNCKHFIDFIEEEDVDLLFSSIQEILKAAVMADADILSE
TFEVWMECAKNLSTRLSALVPEGLYLPAPPLYCPQPASVSESGACDQAQNSERISRQKIS
GVLQRVVLLFRASRCSIPSAHWYIRKLKHIRKIMNKIHLKESIHSLSPFPESLLKYTKAG
QGFFKPGPSGDMTLDKVSTAIIVCFRELCALCWMFHVRESLSDSCRRYCIARDNIRKPQD
FEKPVEYDACMVEHCISALEWACRLLPFSRFLNVEEVVQDMILSLIAELPPTKKVAEILV
KAFSDIENVRVPLRDKYHSLLQRLRHTVVKGPTGEDMMSVVIHNYQKQRSKTLRRVARNI
GPLECHIWEPAEEGTAENDLHIYDRFSLGTSVSRSTLTDLGKPQVYSDGETADTISEALL
AEESRNPSELYQSNVKVQIEEKTENQNENEEAKNFEANVKSIEKGTESHTLPVVGTWEFE
CDDDEYVRFLELFFSYLLEKELVNNIDPNIPLLTSFSDHLKEHELNSLLFDVQTTLKRRQ
NKTTGVNNNFFRAGSCYCTTSVSDQAEKPASLYNEVPRRLVDQDQLNSAVVSNLPRTDSY
IDQHLPGVNNPGKLKGLFGSKQQSMSPFQERGQEIPPTPRTFSALSQSFSDVLSSPCPYQ
IDGSNSIVILHKEGVIPAEDLTPELKAKFKGTARLLEWMIRWSEKRLHYGPSKVERLQEY
NTVIRVKTSAAAILTSLWLLDRRYCKELPHANSNFRVPESQYIVAPVFQPETRQKVDRES
SVDTGYPGSAGTPVGAVDPEAFVGLAENLSEISSDTVDHEEKDVEDDYYPQCLRNREHPS
EMDDNTEQEGALLEEAVDFSQDEIVGPPVQTIKSSSISVSIKHIPRSKETEEGKLQSVSS
LDLESPESTPYEEQGAGQYGKENVRENGITGNPNVASTLSPDMNTATSRPLSSGGPTLAS
VTSNQATVNPQCFPGVTTSSAPTVAAGSGQRESQDAEPVSPPLNTSEVVRQMFQDEMFRL
VQLQQINFMSLMQVVGLSLANLPNMQLSQNGQMAGGLSLNQMRERAEMRCQSAQSTVDQP
TNSTPVIPEVSSRERNTENFHGCSCGQNARNNKPQEQSNKENLAENPPELALHLHSPGGQ
SDIPVVNPASRGLIATAPTKCLPLIMPSPNLRPVPTLVPTDKRLSTVNGLPLLKLQHLHQ
FKPINVPLGRMVISPPQVSFQLPSQPREVWGPSSQSQHLPRPQREKSAPPTHLNLAEYNP
EVLQKEERRRAEPTTEDPPKHLKLDQYNNQPSSVGLQHRNDEKHEESVPDLQPSLSYRPH
FYSTGIPLLHLQHGLSQPLQRPFVPLGLPQVAIIPPVTKPKTTVNSSLARPPAPSTEYPR
IPLLKTNLPPNSKVYSATLPFQPPKLIPVQHLIAFEQKHHRSLGGHPEQIQLLRAVIEPF
EPRVEQNAKKRQKRRVEKKLEEEMKKKKGPSVNVTFCPEDSIINPDTLDGIAPTEERKPT
PSRSELGEGFVIPPGSFDFILKEQDSVLGPAPTSAEMHLFASTLKKPAERQDACTNTEPE
RCVPASVPQVVPPDVFLNLRFPEEVKEPLPTQTSNATSKQDLVGHKFISVIDIEAEDLLK
NLPSAVAPEVVAASDHDSSHRLSPSTAELHFMAASVTNSVPPEQFQERECKIQEPLAKVQ
EDQEPELAGDVLTQKLLLQDVGTYPVEQSQRSLQGKQLSKTQFAAKLNEMDAQLSALQNL
AENMELDFADTRLLMNTIENVGLVIDPELETMSYSTKRVGVIEEVVPKVKRVVLEDLLEE
DELLKSPVITPPVLQNRSIFPSASTLSITSDMTNSLTGLQVFAAALASLCGENSKEDALQ
LTGLSDVADIIIELFKDGKASATELGLSETQAKKISSMATNHSISEGSSPKRTEKERKEI
QEWMKRKRRQRMSEFLKKRSELVESEHSPFKSKKLEGSLTANEIRLNKKIKMEKDKLLLS
KHHDRRILQAVDLMNEMLTETVQLPTADLQPLSETSSKLTHRSRRQLLGSARGSRPDSRS
LSASRVERSPLTVRSGSARSRPMSSPVSSLKVGGTSTRLQQNSFSAFKGKGSRATSLHHS
RPASSLPQDRMSQVTRRGMLTDLNKWRSHSQAIMKHKQILSKNSSAVDNQAYTYKVFHGN
PLQGPGPYNKISRMKEDSTDVQSERELLSPWSPPDDIKRILEKDDTLLQQDPLFCEDNDP
RFGIANLDGMDNLSESTGSILSKLDWNDIENMLASEKL
NT seq
10017 nt
NT seq
+upstream
nt +downstream
nt
atggagttaaaattggaggttttagcgtctatcagcattaaacacaagaagccatggcct
cgagtttgctggcttgggaaggaaaaagaacgtgtgtttcttttaggtgacaagcatatg
agtgaaattaatctcttatcaggaagaaccaagaaaaaagcccctaagctacagtcgcag
ctgaaaaatgcaatcgccataacgacttccagaaatggtgcctggttggcaggaattctc
cactcgggtgatctttttctgtggaataaagatcgggactgtttgaaaattgtacctgca
gctgaagaagctaaaaaagtggccactgctacacaagaatgtacagtgaatatttactta
tttgtatccggagatgggaaaagagttctatttactacttcaccaggacatatatttctg
tgggagagcgcagataatgaagatttaacatctgtctcctatccttcattggttggaaag
tggtcacaaatagttccggatgagtcagtaaaactaccttctactttggacaaagaagca
gcagtggaagctgtatttagtaaagatgagacacttggagattgttgcttgtgttctttt
gtatttacttctggagcctgtttaatattaaccttcctggctgtacagtggtatgaaaat
gctgagaagtacattagctctgtgtcgtttcaagtgaagtgggcaacacaggaatgttca
cttactactttgtttcctcggtgtgaaccaattaagtcaagaggggctgttgtcaccgca
ttctcggaagatggacttatactagcagttgctattaatcagaaggatccaaaggctacc
caagttctttttgtaaactctctgaattttgtgacagtctccagtagcctcaaaggctgt
ggcagcaaggatcttaaaatcccattgaagtttactagatcatactgggttgctgacatg
agctggacacatgacaacctctttttggcttgtgtgttaaaaagaggtgccttgctgttt
gtgacacgtcttggggaactgttaactttggttacttttggctgctcggttgagtttgga
ccagctgagttcattccactacatccactaataacttacaggcctcaacaatctgtcttt
caaagtacagatcctaatcattctccaggttcatctgcctctgaaaatgattctatgagg
cagaggtactcagtaactacacatccacggttcccctacctccttgtctcagatggatac
atgattacagcacttagagcatcagataaccactcgccttcaaatttcataaaatcacta
ttactggatgctgtggaaaggctagagcatatgcgtcaggctttcttgaaatgccagcca
aaggagaagaagttgaaattgaagtcaatgtcttccttgaaagacagcctcatgcagcat
caagtaaacccaaaatctaccttgcctacaattcccagatttctgcaagaggaggaagaa
gcatcacaagtacaggagaaatctgtggttggtcagtgtaatgaagatgagtctgatgat
ggatgccactttccaaatgatattccaacttctcaaagcaaaaaacagaattcacctttt
gatatgatggatcagtgtagattggagtttgcatctatgtttgataccattcatgctaag
gaagatcctgatgaagctgatgatttttctaaagagtttaaacaaattcaaaaaatcctt
ctaacagcttggagtacaggaatattgctgaaggatgttgaagaaaaagaaaagttgttg
aattacactgttagatgcattgttcgctttgcccaccttctacagtttataaagtgtcct
ctgccaatgtttgttgaaaacttgagtgataaaacgttgaaaaagctggtgaaaaaggac
tcctggatatacagagtcttgcaccttttccatcagtgcttaacagttctattctgggac
actgcacataagcagtctttgactcgtatagtaaagctaacgtctgaaattactaagtta
atttttcttcagcaaaaggaccagttattttcacaaactcttttaggatgtttctatata
ctaaatcaaaccgctcactacctcaatataatatacgctccacattgtgagctttttcca
gtctcccccagctcatgtgaagctataacactagactcctttaatatccctttatttcag
ccagtagaagacaatattcagaaactctcttcactgcttctactgccttgtcacgcagta
aatttggctcagacagtgtctgataggttaactatattgtggcaagtattgtacagaaga
acattatggtaccaatcccatcttggaaggcaaaagaatctgcatgggaggaattcagaa
gatgagaagagcagatcagaacagtctactgttgcactactctgctcccggattcaggca
gtcttacagtctaagagacaaaacctagagcctaacaagaccctgaatactgttttaggc
agttgtcattttccaggtgaagagcttttccttctaggttcatacatggaatccgtaaag
gtatggaggactgcattgcagaaggagattggaaaaggaggaaaaagaactgtttttctc
cagacccgatactacttggccatcttgtattctcatttgtaccactataatctatgtgct
gcccagggactgtgcgatcagttagtgagagaggttttaaaccgaccccagttgtctgct
gaggatgtgcaaaattctgtagttgcagagtgccctcgtctggagccattgacagagaga
gagatttataatgaggtatcatttgcagtggttcagtccatggcaaggtttatggccgcc
tacttcactaatcagccactgtatgtactgccacctcactgtgttgatattctgccttca
ctatacgtcaaaccagatcacctacccagagtggttcccctgcagcactcccgcatggcc
agcgttgttagagatcagcagctttctgctttgtggactgtggaatatgctatggattta
tttctgattggtgggttagttccagaggcaacttggttggctcatagacttggcgactgg
aagacagcagtttctttaggcttggcctacagtctgtactgtcagaataactcctatttt
tctagcctcagatggagagagcttcaccttcccttagaacttcgacctgcacaagttttc
caagacaaacttcagtcaatcctgggacagccagcaaaatcaggaataggcaatggagag
atcagcaactgtaaacatttcatagatttcatagaagaggaagatgtggatttgcttttc
agttctatacaagagatactaaaagcagctgtcatggccgatgcagacatcctgtcggag
acatttgaagtttggatggagtgtgctaaaaacctcagtacaagattatctgctttagta
cctgaaggactttacctcccagcacctccattatattgtcctcaacctgcttctgtcagt
gagagtggtgcatgtgaccaagcacagaattcagagagaatatctcgtcagaaaatatct
ggagtacttcagcgggttgttctgctcttcagggccagccgctgctccattccttctgca
cattggtacatcagaaagctgaaacatatcagaaaaataatgaacaagattcatctgaag
gaatctatccattcattaagtccattccctgagtcactgcttaagtataccaaagctggt
caaggattttttaaaccaggacccagtggagacatgacacttgataaagtatcaacagca
attatagtttgttttcgagaactttgtgcactctgctggatgttccatgttcgtgagagt
ttgtctgacagttgtaggcgatattgtatagccagagacaatatcagaaaaccacaggac
tttgagaaacctgtagagtatgatgcctgtatggttgaacactgtataagtgcgctggaa
tgggcttgtcggttactcccattctctagatttttgaatgttgaggaagttgtacaagac
atgatcttgagtcttattgcagaactgcctccaactaaaaaggtggcagagattttggtg
aaagcattttctgacattgaaaatgtacgtgtaccactgagagacaaatatcactctctt
cttcagcgcctcaggcatactgtagttaaaggaccaacaggtgaagatatgatgtcagtt
gttattcataattaccaaaaacagagatcaaaaacactgagacgggtagcaagaaatatt
ggtcccttggaatgccatatttgggaaccagcagaagaagggactgcagagaatgacttg
catatctatgatagattctctcttgggacaagtgtaagcaggagcacactaacggacctt
ggtaaacctcaggtttacagtgatggggaaacggctgataccatttcagaagctctgctg
gcagaagaaagcaggaatcctagtgaattatatcagagcaatgtgaaggttcaaatcgaa
gaaaaaactgaaaaccaaaatgaaaatgaggaggccaaaaactttgaagccaatgtcaaa
tccatagaaaagggaaccgaaagtcatacattacctgtggtgggcacttgggagtttgaa
tgtgatgatgatgaatatgtcaggtttttagaacttttttttagctacttgcttgaaaag
gagttagtaaataatattgatcctaacattcccttactgacaagtttttctgatcacctt
aaggagcatgaactgaattccttgttgtttgatgttcaaacaactctgaagcgccggcag
aacaaaactactggtgtcaacaataattttttcagggcaggaagttgctattgtacaact
tctgtatctgaccaagctgagaaaccagcttcattgtataatgaggtaccaaggagattg
gtagatcaagatcaacttaactctgcagttgtttctaatttaccaagaacagattcatat
attgaccagcatttacctggagtaaataatcctggtaaactgaaaggtttgtttggctca
aaacagcagtccatgtctccatttcaagaaagaggtcaagaaataccacctacacctaga
acattttcagcattaagtcagagtttttcagatgtgctttcttctccctgcccttaccaa
attgatggaagtaattctatagtaatcttacataaagaaggggttataccagcagaagat
ctgactccagagctcaaggccaagttcaagggcactgcaagactgctggagtggatgatc
agatggtctgaaaaaagacttcattatggccccagcaaagtagaaagattgcaggaatac
aacactgtgataagagtgaaaacttcagcagctgctattctcacatcactttggctgtta
gacagaagatactgcaaggaactaccacatgcaaactcaaattttagggttcctgagagt
cagtacattgtggctcctgttttccaacctgaaacgagacaaaaggtggacagagaaagc
agtgtggacactggttatcctggctcagccggaacacctgttggtgcagtggaccctgaa
gcctttgtaggacttgctgaaaacctttcagaaatatctagtgacacggttgatcatgaa
gagaaggatgtagaagatgattattatccacaatgtttaagaaacagagaacacccatca
gaaatggatgataacactgaacaagagggagcacttttggaagaggctgtggatttttca
caagatgaaattgtaggaccaccagtccaaaccattaaaagctcaagtatctctgtaagc
attaaacatataccacgatcaaaggaaactgaagaaggaaagctccaaagtgtctcaagt
ttagatttagaaagcccagaatccacaccttatgaggaacaaggagcaggccagtatgga
aaggaaaatgtaagagaaaacggcattactggtaatcctaacgttgctagtactctgtct
cctgatatgaatacagcaacatcaaggccattaagtagtggaggccctactttggcttct
gttactagtaaccaggccactgtgaatccccagtgttttccaggcgtcactacttccagt
gctccaactgttgctgcgggaagtggacaaagagagtcccaagatgcagaacctgtttcc
ccaccattgaacacttcagaggttgtccggcaaatgttccaagatgaaatgtttaggctg
gttcagctgcagcaaatcaactttatgagcctaatgcaggtagtcggtttgtcactagcc
aaccttcctaacatgcaactatctcaaaatgggcaaatggccggaggcctatctttaaat
cagatgagagaaagggctgaaatgaggtgtcagtctgcccaatcaacagtggaccaaccc
acaaactccactccagtaatcccagaggtatcctccagagaaagaaacactgagaatttc
catggctgcagttgtggacagaatgcgagaaataacaaaccacaggagcagagcaacaag
gaaaatcttgcagagaatcctccagaactggcccttcatttgcattcaccaggaggacag
tcggatattccagtagtgaatccagcatctcggggtttgattgccactgctcccaccaaa
tgccttcctcttataatgccttcacctaacttgagacctgtacctacccttgttccaaca
gacaaaagattaagcacagtaaatggtcttccccttcttaagctgcaacatctacatcag
ttcaagccaataaatgtgcctttggggcggatggtaatcagccctccacaggtttctttt
cagcttccttcacagccaagagaggtctggggtccttccagtcagtcacagcatctacct
aggccacaaagagagaaaagtgcaccaccaactcacttgaatttagctgaatataatcca
gaggtcttacaaaaagaagagagaaggagggcagaacccacaacagaagacccgcctaaa
catcttaaacttgatcagtataataaccagccaagctctgttggtctgcaacaccgaaat
gatgagaagcatgaagagagtgtgccagatttgcaaccatcattgtcttacagacctcat
ttttattctacaggaattcctttgctacacttgcaacatggtttatcccagccacttcag
agaccttttgttccacttggtttacctcaagtagccatcattccacctgttacaaaaccc
aagacaactgttaattcaagtcttgcaagaccaccagcaccctcaacagaatatccaagg
ataccactgcttaaaacaaacttgcctccaaatagcaaggtttactcagctacccttccg
tttcagcctccaaaacttatcccagttcagcatctcattgcctttgaacagaagcatcac
cgttctctgggaggacaccctgagcaaatacagcttttgagggcagtcattgaacctttt
gaaccaagagtagagcagaatgctaaaaagaggcagaagaggcgagttgaaaaaaaattg
gaggaagaaatgaaaaagaagaaggggccaagtgtgaatgtcactttctgtccagaggat
tccattatcaatccagacactttggatggaattgctccaacagaggaaagaaagccaaca
ccttcaagatctgagcttggtgagggatttgtcattccgccaggttcatttgacttcatc
ttaaaagagcaagactcagttctaggtcctgctcctacatcagcagaaatgcaccttttt
gcgtcaaccttaaaaaaacctgctgaacgccaggatgcctgtacaaatacagaaccagaa
agatgtgtacctgcaagtgtccctcaggttgtacctccagatgtgttcctaaacctcaga
tttccagaggaagtgaaggagccacttcctacgcaaacttcaaatgctacatcaaagcag
gatcttgtaggccataaatttatcagtgtgattgacattgaggcagaagaccttcttaag
aacctgccatctgctgttgcaccagaggtggtggctgcctctgaccatgatagtagccat
agactcagcccatccactgctgagcttcactttatggcagcctcagttacaaattcagtc
cctccagaacagttccaggaaagagagtgtaaaattcaggagccactggccaaagtacaa
gaggatcaggaaccagagctagctggtgatgtcttgactcaaaagttacttctgcaggat
gttggcacttaccctgtagagcaatcacaacgttctcttcaagggaaacagctaagtaaa
acccagtttgctgcaaaattgaatgaaatggatgcacagctgtctgcattacagaacttg
gcagaaaatatggaacttgactttgctgacaccagattgctgatgaatacaatagaaaat
gtgggattagttattgacccagagctggagacaatgtcttactcaacaaagagagttggt
gtgattgaagaagtagtgcctaaagtgaaacgagtggtgttagaagatcttcttgaggaa
gatgagttgctcaagtctcctgtaataactcctcctgtcctgcagaaccgctccattttt
ccttctgcttctactctcagcatcactagtgacatgaccaattctttgactggtttacaa
gtgtttgcagctgcactggcatcactatgtggagaaaattcaaaagaagatgcccttcaa
cttactggactaagtgatgttgctgacatcattatagaactttttaaagatggtaaagct
tcagctacagaactaggtttatcagaaacacaagcaaagaagatctccagcatggccacc
aaccattccatttcagaaggaagtagtccaaagagaacagaaaaggagcgcaaagaaatt
caagaatggatgaagaggaagcgacgacagagaatgtcagagtttctgaaaaagcgcagc
gagctggttgaaagcgagcatagcccttttaaatctaagaaattggaaggtagtcttact
gctaatgaaattagactgaacaagaaaataaagatggaaaaagacaaacttctgctaagt
aagcaccatgatcgccgcattttgcaggcggttgacctaatgaatgagatgttaacagaa
actgtacaacttccgacagctgatctccagccactgtctgagacatcatcaaagttaaca
cacagatcacgcagacaactccttggatctgcacggggaagtcgccccgatagtcgtagt
ttgtctgcaagtcgagtagaaagaagcccattgactgttcgctctggttcggcacggtca
cggcctatgtcttctccagttagttcgctgaaagtaggaggaacttcaactcggttgcaa
cagaatagtttttctgcctttaaagggaaaggaagtagagcaacttcacttcatcactcc
agaccagcctcctctctacctcaagatcgcatgtcccaagtcacacgcagaggaatgctg
acagacctgaataaatggagaagtcattctcaggcaattatgaaacacaaacaaatcctg
agcaaaaatagttctgcagtagataatcaagcttacacatataaagtgttccatggcaac
cctttgcaaggacctgggccatacaacaaaattagtagaatgaaagaagatagtacagat
gttcaatcagagagagagttactgagcccatggagccctcctgatgacattaagagaata
ctggagaaagatgatactcttttacagcaggatccattattctgtgaagataatgatcct
cgatttggtatagcaaacttagatggaatggacaacctttcagaaagtactggcagcatt
cttagcaagctcgactggaatgacattgaaaatatgttggcaagtgaaaaactgtaa
DBGET
integrated database retrieval system
