KEGG   Latimeria chalumnae (coelacanth): 102359142
Entry
102359142         CDS       T02913                                 
Symbol
SQSTM1
Name
(RefSeq) sequestosome 1
  KO
K14381  sequestosome 1
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04137  Mitophagy - animal
lcm04140  Autophagy - animal
lcm04217  Necroptosis
lcm04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    102359142 (SQSTM1)
   04137 Mitophagy - animal
    102359142 (SQSTM1)
  09143 Cell growth and death
   04217 Necroptosis
    102359142 (SQSTM1)
   04218 Cellular senescence
    102359142 (SQSTM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcm04131]
    102359142 (SQSTM1)
   03029 Mitochondrial biogenesis [BR:lcm03029]
    102359142 (SQSTM1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcm04147]
    102359142 (SQSTM1)
Membrane trafficking [BR:lcm04131]
 Autophagy
  Mitophagy
   Cargo receptors
    102359142 (SQSTM1)
  Pexophagy
    102359142 (SQSTM1)
  Aggrephagy
    102359142 (SQSTM1)
  Xenophagy
    102359142 (SQSTM1)
  ER-phagy
   ER-phagy recepters
    102359142 (SQSTM1)
  Other autophagy associated proteins
   Midbophagy
    102359142 (SQSTM1)
Mitochondrial biogenesis [BR:lcm03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    102359142 (SQSTM1)
Exosome [BR:lcm04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102359142 (SQSTM1)
SSDB
Motif
Pfam: UBA_5 ZZ PB1
Other DBs
NCBI-GeneID: 102359142
NCBI-ProteinID: XP_005995405
Ensembl: ENSLACG00000012177
UniProt: H3AW10
LinkDB
Position
Un
AA seq 441 aa
MSVTVKAYLLGKEDCKKEIRRFGVDLEVSASFSFLTQKVIEVFQSLKEGCFQLYYQDEEG
DMIAFSSDEELVMALGSVKDDMFRIFIKERKECRREFRQQWNQERLNNILHPNVICDGCD
GPVTGTRFKCVVCPNYDLCGGCKEKAVHKEHEMIAIPTPLAYLSQWMPPGPWFHRMRRGF
PHCPRTAGLPPHHPCGPCPNTGKSAPNSKPQASETQQAGASDTPPQNPGLSYLQSIGESV
ASLLSPLGIDVDIDVEHGAQRTKVTPAKPKSEGQDSHQDPAPADQNRQKKSSQDSKAVLV
EEELPGSPMEVAEKAETNEPSETGSTLGSDEEWTHLSPKEVDPSTGELQSLRAQGAEGPH
SLNLSEESAVCQEGPSGLREAAVYPHLPPDADPRLIETLSHMLSMGFNDEGGWLTQLVQA
KNYDIGAALDAIQYPKQPDRK
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgtctgtgacggtgaaggcttacctgctggggaaggaagactgtaagaaggagatccgc
aggttcggggtggatctggaggtttccgccagcttcagcttcctcacccagaaagtgatc
gaggtcttccagagcctcaaagagggctgcttccagctctattaccaagatgaagagggg
gacatgattgcattttcaagtgatgaagagttggtgatggccctgggcagtgtgaaggac
gacatgtttcgtatcttcatcaaagagaggaaggagtgcaggcgtgagttccgccaacag
tggaatcaggagcgcctcaacaacatccttcaccccaacgtgatctgcgatggatgtgat
gggccggtgactggcacccgcttcaagtgtgtggtgtgcccgaactacgacctgtgcggt
ggctgcaaggagaaggctgtgcacaaggaacacgagatgatcgccataccgactccgctg
gcctacctctcgcagtggatgcctcctggtccatggttccacaggatgaggcggggtttt
ccgcactgcccaaggacagcaggactgcccccacaccacccctgcggaccctgccccaat
actgggaaatctgcccccaactccaagccccaggcctcagagactcagcaagctggagcc
tctgatactccaccccaaaaccctggcctctcttatctccagagcattggcgagagtgtg
gcttccttactgagccccctgggcattgatgtggacattgatgtggaacatggcgctcag
aggaccaaagtaacccctgccaagccaaagtccgaaggacaggactcccaccaggaccct
gctcctgctgaccagaacaggcaaaagaagtcgtctcaggacagcaaggctgtcctggtg
gaagaggagctgcctggttctcccatggaggtggctgagaaagctgaaaccaacgaacca
tctgagaccggtagcaccttggggagtgatgaagaatggacccacctgtcccccaaggag
gtggatccctccactggggagctgcaatctctgagggctcagggggcggagggcccacac
tctctcaatctgtcagaagaatccgctgtgtgccaggaagggccctctggcctgagagag
gcagctgtttatcctcacctgccaccggatgcggacccgcggctgatcgagaccctctcc
cacatgctgtcgatgggtttcaatgatgagggaggctggctgacccagcttgtgcaggcc
aagaactacgacatcggggctgcccttgatgccatccagtaccccaaacagccagaccgc
aaataa

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