Latimeria chalumnae (coelacanth): 102361386
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Entry
102361386 CDS
T02913
Symbol
PDGFRB
Name
(RefSeq) platelet derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04010
MAPK signaling pathway
lcm04020
Calcium signaling pathway
lcm04510
Focal adhesion
lcm04540
Gap junction
lcm04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102361386 (PDGFRB)
04020 Calcium signaling pathway
102361386 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102361386 (PDGFRB)
04540 Gap junction
102361386 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
102361386 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcm01001
]
102361386 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lcm04090
]
102361386 (PDGFRB)
Enzymes [BR:
lcm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
102361386 (PDGFRB)
Protein kinases [BR:
lcm01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
102361386 (PDGFRB)
CD molecules [BR:
lcm04090
]
Proteins
102361386 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
Haspin_kinase
RIFIN
Stevor
Fig1
HXXEE
Recep_L_domain
Orf78
Motif
Other DBs
NCBI-GeneID:
102361386
NCBI-ProteinID:
XP_014351483
Ensembl:
ENSLACG00000014583
LinkDB
All DBs
Position
Un
AA seq
1095 aa
AA seq
DB search
MMNFKRLSPLLKLTFLAGLLLLVVGSDGIEISPSEPEFVLPLSTNFSLTCTGTEGVAWLN
DTFARSSNVEVTNGPLSSTLTIYSVTGHNTGEYVCVHSKSKDESGEKKSVYLFVPDPDVW
FVPQEPNEEFVFTLSNEQSTIPCYVTDPQAQVTLYERNDDILIQATYIQQRGFVAHLEDT
SYYCKASLNGEERKSEVYYVYKIKVNPQLEVYVNATQTVVKKGEPITVICNINGSEMMNI
SWLYPRRSTGETLEPVTDFSPGPDWHLRSILAIQEGVLADSGRYTCAVYETTTGRIDQQS
LNISVLEKGFVQLTADINRTELAELHHSKLFSVGIEAYPRPTIKWLKGNRTMNENSDEIS
ITNTRISETSYESTLTVVRVKERDSDSYSLEVFNEDDVQKFTFYLYVNVPVRILELLDHH
YDTGGQRVTCVAEGAPQPDILWYICKNLESCSKDATWGALNSNVENIVELKNLSYNESRK
LHRVRSVLKFHSVEESITLRCVANNTLGQQAQEINLVSKSLQFRVAIISAILVLLVLVII
FLIILIVFWRKKPRYEIRWKVIESVSLDGHEYIYVDPMHLPYDSSWEFPRDRLVLGRTLG
SGAFGRVVEATTYGLCNSKSSMKVAVKMLKSTARSSEKQALISELKIMSHLGPHLNIVNL
LGACTKGGPVYIITEFCRYGDLVDYLHRNKHTFLQYYADKARREAEIYGNDLSEAKDKSV
TSLSLDSDGGYMDMSKDDLVEYVPMQELKEDIKYADIEPSVYETPYQQESYSTPGQERTE
TIVLINESPILSYTDLIGVSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGL
ARDIMHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPEL
PMNEQFYNAIKRGHRMSKPTHALDEIYEIMQKCWDEKFEKRPPFSQLVHLLGNMLADSYK
KKYNQVEEEFMKSDHPAVKRTKPKCIVVNNGNPSPNYYSEVGLNTPEIKAVGQAPDNNYI
IPLPDLQPEEEDSEDVSTMASGEQPSSALNEENTASTISCDVPLLTPEEGSVETEANPSS
MEQDSRHSDIEESFV
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattttaagagactatctccgttactgaagctgaccttcctcgcaggacttctt
ctcttggtggttggcagtgacggcatagaaatctctccgagtgaaccagaatttgttctg
cctctctccactaatttctcgctgacgtgcactgggacggaaggtgttgcttggttgaat
gacacctttgcaaggagctcaaatgtggaagtgacaaacggacctctttccagcactctc
accatctacagtgtgacaggccacaacacaggagagtatgtttgcgttcacagtaaatcc
aaggacgagagtggcgagaaaaagagtgtgtatctgtttgtaccagaccctgacgtgtgg
tttgtcccacaagagcccaatgaggagtttgtgttcacactttccaatgagcagagcacc
atcccctgttatgtgaccgacccccaggcgcaagtcaccctctatgagaggaatgacgac
atcctcatccaagctacctacatccaacagcggggctttgtggcccacttagaagacacc
tcctactactgcaaagcatcacttaacggggaggagcgcaagtctgaggtttattatgtt
tacaagattaaagtgaacccacagctagaggtatatgtcaatgctacacagacagtggta
aagaaaggagagcccatcactgttatctgcaatattaacggaagtgagatgatgaacatt
agctggctgtaccctcgcagatctactggagagacactggaaccagttacagacttctcc
cctgggccggactggcacctgcgctcaattttggcaatccaggagggagtgctggcagac
tcgggccggtacacctgtgcagtttacgaaacaacgacaggcagaatagatcagcagtca
ctcaacatctctgtcctggagaaaggatttgttcagctcacagcagacattaacagaact
gagctggcagagttacaccacagcaaactgttctctgtgggcatcgaggcctatcccaga
ccgaccatcaagtggctgaaaggcaacagaactatgaatgaaaacagcgatgaaatctca
atcacaaacacgaggatctcggaaaccagttatgaaagcacattgactgtagtaagagtg
aaagaaagagacagtgatagctacagcctcgaagtcttcaatgaagatgatgtccaaaag
tttaccttttatctctacgtcaatgtgccggtcaggatactggaactgttggaccatcat
tacgacactggagggcagagagttacttgtgtggctgagggagctccccagcctgacata
ctctggtatatctgcaagaacttagaaagttgcagtaaagatgccacctggggagccctg
aactccaacgtagaaaacatcgttgaactcaagaacttgtcgtacaatgagagccggaaa
ctgcatcgtgtgcggagtgtactcaagtttcacagtgtggaggagtctataacactccgc
tgtgttgccaacaacaccctgggacagcaggctcaggaaattaatctggtttcgaaatct
ttgcagttccgggtggcaattatctccgccatcttggttttgttggttcttgtcatcatc
ttcctgattatcctcattgtgttctggcggaagaaacctcgttatgagatccgatggaag
gttatcgagtcagtcagtttggacgggcacgagtacatttatgtggaccccatgcatctc
ccctacgactccagctgggagtttcctagagaccggctggttttgggtcgtacgctcggc
tccggtgcattcggcagagttgtcgaagccacgacgtatggcttgtgtaattcaaagtcg
tccatgaaagtagctgtcaaaatgctgaagtcaacagccaggagcagcgagaaacaggcc
ctgatatcagagctgaagattatgagccatttgggtcctcatctcaacatagtcaacctg
cttggtgcctgcacaaaaggaggccctgtttacatcatcactgaattctgtcgctatgga
gacctggtggattatctgcacaggaacaagcacacattccttcaatactatgcagataaa
gccaggagggaggcagaaatatatggaaacgatctgagcgaggccaaggacaaaagtgtc
acgtctctgtcccttgacagtgacggtggctatatggacatgagtaaggatgatttagtg
gaatatgtgcccatgcaggagttaaaggaagatattaaatatgctgacattgaaccctcg
gtctacgagacaccttatcaacaggagagctacagcacaccaggtcaggagaggacagaa
actattgttcttataaacgagtctcccatcctcagttacacggacctcattggagtgagt
taccaggtggccaaaggaatggaatttctggcctccaaaaattgtgtgcatcgggatctg
gcagcgagaaacgtcctgatttgtgagggcaagctggtgaagatctgtgactttgggctg
gccagagacatcatgcatgattccaactatatctccaagggcagcaccttcctgcccctg
aagtggatggcccccgagagtatcttccacaacctctataccacactgagtgatgtctgg
tcatatggaatcctcctctgggagatcttcaccttgggagggacaccttatcctgagcta
ccaatgaatgagcagttttacaatgcaataaaacgtgggcatcgcatgtcaaagcccacc
cacgctctggacgaaatctatgagatcatgcagaagtgctgggatgaaaagtttgagaag
aggcctcctttctcccagttagttcatctcctgggaaacatgttagcggacagctacaag
aagaaatacaaccaagtggaggaggaatttatgaagagcgaccacccagcggtcaagcgg
acgaagcccaagtgcattgtggtcaataacggcaatcccagtcccaactactacagtgaa
gttgggctgaacacccctgagataaaggctgtggggcaggcccccgataacaactacatc
atccccttacctgatctgcagccagaggaagaagacagtgaggatgttagcaccatggct
tcaggggagcaaccaagttcagctttgaatgaagagaatacagcatctacaatctcctgt
gatgtgccattgttgacaccagaagaagggagcgtggagactgaggcaaacccttcctct
atggagcaagactccaggcattcagacatagaggagagctttgtgtaa
DBGET
integrated database retrieval system
