Latimeria chalumnae (coelacanth): 102363284
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Entry
102363284 CDS
T02913
Symbol
DHX9
Name
(RefSeq) DExH-box helicase 9
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcm03041
]
102363284 (DHX9)
03012 Translation factors [BR:
lcm03012
]
102363284 (DHX9)
Enzymes [BR:
lcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
102363284 (DHX9)
5.6.2.6 RNA 3'-5' helicase
102363284 (DHX9)
Spliceosome [BR:
lcm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102363284 (DHX9)
Translation factors [BR:
lcm03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102363284 (DHX9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
ResIII
AAA_22
AAA_19
Dicer_dimer
nSTAND3
AAA_14
Motif
Other DBs
NCBI-GeneID:
102363284
NCBI-ProteinID:
XP_005991146
LinkDB
All DBs
Position
Un
AA seq
1251 aa
AA seq
DB search
MGDVKNFLYAWCGKKKVTPNYDIRAAGNKNRQKFMCEVRVDGYNYIGMGNSTNKKDAQSN
AARDFLNYLVRLGELRADEVPSLGAGASDSTDGFASPGEVGDLPGNGPLPPHLMIKSEPG
SGPPAPSGGYAAYNAQWDRGANLKDYYSKRDEQEAQATLESEEVDLNAGLHGNWTLENAK
ARLNQFFQKEKIQGEYKYSQVGPDHNRSFIAEMHIFVRQLGRRIFAREHGSNKKLAAQSC
ALSLVRQLYHLGVIEAYTGQTKKKEGESLEAFPVNVSPEIEKQLEATVHDLGLEIVPSPP
DPSYPVSLMFGKLAHFEPSQRQNMAGVVPWSPPQVNWNPWTSSNIDEGPLAFATPEQISS
ELKSELSYQLQQDQSLHQILQEREQLPVKNFEQEILRAIHHNPVIIIRGATGCGKTTQVP
QYILDEYIHSGRASDCNIVVTQPRRISAVSVAERVASERGEDLGKSCGYSVRFESVLPRP
HASILFCTVGVLLRKLEAGLRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPDIRIILM
SATIDTSMFCEYYFNCTIIEVYGRTYPVQEYFLEDAIQMTRFVPPPRDKKKKDRDEEGGD
DEDTNCNLICGDDYGPETKRVMAQLNEKETPFELIEALLKYIETLNVTGAVLVFLPGWNL
IYTMQRHLEMSPHFGTHHYKILPLHSQIPREEQRRVFDPVPDGVIKVILSTNIAETSITI
NDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF
ERLETHMTPEIFRTPLHEVSLSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDAL
DSNDELTPLGRILAKLPIEPRLGKMMIMGCIFHVGDAVCTISAATCFPEPFINEGKRLGY
VHRNYSGSRFSDHVALLSVFQAWDDARMGGEEAESRFCEHKRLNMATLRMTWEAKVQLKD
ILINSGFPEECLMTQVFNNTGPDNNLDVVISLLAFGVYPNVCFHKEKRKILTTEGRNALI
HKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKSMTMVSPLQLLLFGSKKVISDGEII
LVDDWIKLQMSHSVAACISALRAGMEALVVEVTKDPEFIRQLDPTHERMLNMIRQISKPS
VAGINLMMSNSRFGDGPRPPKMARFDNGRGRGGSGYRGGGGGGYGGGYGRGGGGGGYGGY
GRGGGYNSSRGGYGSYRGSGGGYRGGYQGGGGYGGGGYEGGYGGGRGRGGY
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgttaagaactttctgtacgcttggtgtggaaagaaaaaagtgactcccaac
tatgatatccgggcagctgggaataaaaacagacaaaagttcatgtgtgaggtacgagtg
gatggatataactacattggcatgggaaactctaccaacaagaaggatgctcagtccaat
gctgccagagactttctcaactatcttgttcgacttggagaactgagagctgatgaagtt
ccttctctgggggctggagcatctgattcaactgatgggtttgcttcgcctggagaagtt
ggcgatttgcctgggaatggaccacttcctcctcacttaatgataaaatcagaaccaggt
tctggtcctcctgcaccttctggcggatatgctgcttacaatgcccaatgggaccgagga
gcaaacctgaaggattattactcaaagagggatgagcaagaagcccaggctacccttgaa
tcagaggaagtggatttgaatgcaggtctccatggtaactggaccctggaaaatgccaag
gctcgtctcaaccagtttttccagaaggagaagatccagggagaatacaaatactcacaa
gttggaccagatcataacaggagtttcattgcagaaatgcacatttttgtccgacagctg
ggtagaagaatctttgctcgtgagcatgggtctaacaagaaactagctgcgcagtcctgc
gccctgtcactggtcaggcagctctaccacttgggtgtgattgaggcttacactggacag
acaaaaaagaaagaaggagagtctttggaggcatttccagtgaatgtttctcctgagata
gagaagcagctggaagctacagttcatgatctgggcctggagatagtaccatcacctcca
gatcccagctatcctgtctcattaatgtttggaaagcttgcgcattttgagccatcccag
cggcagaacatggctggagttgtaccctggtcaccacctcaagtgaactggaacccctgg
accagcagcaacattgatgaaggacctcttgcatttgctactccagaacagatcagtagc
gaattgaagagtgaactctcataccagttacagcaggaccaaagtctgcatcagatcctc
caggagcgtgaacagctgccagtgaagaactttgagcaagagatacttcgtgccattcac
cacaaccctgttatcataatccgaggcgctactggctgtggcaaaaccacccaggttccc
cagtacatcttggacgagtatatccacagtggcagagcatctgactgcaacatcgtggtg
acacagcctagaagaatcagcgctgtgtccgtggcagaacgtgtggcatctgagcgtggc
gaggatctgggaaaaagctgtggctacagtgtccgatttgagtctgtactgcctcggccc
catgccagcatactcttctgtactgtaggtgtcctgttgaggaaactggaagcaggtctg
cgaggaatcagccacgtcatcgttgatgaaattcacgagagagacattaatactgatttc
cttctggttgtactgcgagatgtggttcaggcatacccagacattcgcatcatcctcatg
tctgccacaattgatacctcaatgttttgcgaatattacttcaactgtactataattgaa
gtctatggaagaacctacccagttcaagagtatttcctagaagatgctatccagatgact
cggtttgttcctcctccaagagacaagaagaaaaaggatcgggatgaggaaggaggtgat
gatgaggatacaaattgtaacctcatctgtggtgatgattatggtcctgaaacaaagcga
gtgatggctcagctgaatgagaaggagactccgtttgaactgattgaagcgctgctcaaa
tacattgaaacactgaatgtcactggagcagtgctggtcttcctgcctggctggaacctg
atttacaccatgcagaggcacctagagatgagcccgcattttggaactcatcattacaag
atcctgccactacattcccagattccccgtgaagaacagcgccgagtgtttgatccagtt
cctgatggagttatcaaggtaattttgtccacaaatattgcagagaccagtatcaccatt
aacgatgtagtctatgtcattgactcctgcaagcagaaagtgaagctgttcacctctcac
aacaacatgacaaactatgccacagtttgggcatccaagactaacctggagcagcggaaa
ggtcgagcgggtcgtgtccggcctgggttctgtttccatctttgcagcagggcacgattt
gaaaggcttgagactcacatgacccctgagatcttccggacgcctttgcatgaggtatcc
ctgagtatcaaactcctgcggcttggtggaataggacagttcttggccaaagctattgaa
cctcctccattggatgcagttattgaggcagagcacacactgagagaactggatgccctg
gattctaacgatgagctgacccctctggggagaatcttagctaagctccctattgaacca
cggctgggaaaaatgatgatcatgggctgtattttccatgttggggatgctgtgtgcacc
atttctgctgccacctgttttccagagcctttcataaatgaaggcaaacgactgggctac
gtacacaggaactactctgggagcaggttctctgatcatgtggcactgctctctgtattc
caagcctgggatgatgcaaggatgggcggagaagaggctgaatcacggttctgtgaacac
aaaaggctcaatatggccaccttgaggatgacctgggaggctaaagtacagctgaaggat
atcctgatcaattctggattccctgaagaatgcctgatgacccaagtgtttaacaacact
ggcccagataacaacctagatgtggttatctccttgctggcgtttggtgtgtatcccaat
gtctgtttccacaaagagaaaaggaagattctcaccacagagggacggaacgccctaata
cacaaatcttcagtcaactgtcccttcagtagccaagacatgaagtatccatctcctttc
tttgtatttggagaaaagattaggacccgtgcaatctctgcaaagtcaatgacgatggtt
agtcctctgcagctgctgctctttggttccaaaaaggtgatttcggatggtgagatcatc
ttagttgatgactggattaagctgcagatgtctcacagtgtagctgcatgcatctctgca
ttacgggcaggaatggaggcccttgtcgtagaggtcaccaaggaccctgagttcataagg
cagctagatcctacacatgaacgcatgctgaacatgatccgtcagatttcaaagccttct
gtagcaggcataaacctgatgatgagcaattcaaggtttggtgatggcccccgtcctcca
aaaatggctcggtttgacaatggtagaggaagaggaggctctggatacagaggcggtggt
ggaggaggatatggtggtggctatggaagaggcggtggtggaggaggatatggtggttat
ggaagaggtggtggatacaactcatccagaggtggctatgggtcatacagaggatcaggt
ggaggttatagaggtggatatcaaggcggtggaggatatggaggcggggggtatgaaggt
ggttatggtggtggccgtggaagaggtggctattaa
DBGET
integrated database retrieval system
